Polyodon spathula (Mississippi paddlefish): 121299344
Help
Entry
121299344 CDS
T07273
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121299344
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121299344
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
121299344
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
121299344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
ESX-1_EspG
Motif
Other DBs
NCBI-GeneID:
121299344
NCBI-ProteinID:
XP_041082983
LinkDB
All DBs
Position
24:complement(8966716..8981407)
Genome browser
AA seq
394 aa
AA seq
DB search
MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLSAQYGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAAAEGHARIVEVLLKHGADVNAKDMLKMTALHWATEHGYQEVV
DLLIKYGADVHVQSKFCKNALDIAIDNANEELAEILQVSMQNQINTNPESPDTVTIHTAT
PQFIIGPGGVVNLTGLVSAANSSKDEAGVSTVQFGNSSTSVLATLAALAEASAPLSNSTE
TPVVATEEVVTADSVEGAIQQVVSSGGQQVITIVTDGIQLGNLQTGGMGQPIIVTMPDGQ
QACFSVLTVPATDIAEETVISEEPSVKRPRIEIIENHSETTEIEEKETLQKQLEEANREA
QKYRQQLQKKEQEAEAYRQKLEAITRHQSNKKAV
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggtggatttaggcaagaagcttctagaggcagcacgagccggacaggatgat
gaggtccgtatcctaatggctaatggagccccgttcacaacagactggcttggaacgtct
cccttacatctatcagcacaatatgggcattactcaaccacagaagtactgttaagagca
ggcgtgagccgggatgccaggactaaggtggacagaacccctttacacatggcggctgca
gaaggccatgcccggatagttgaggtgctactaaagcacggagctgacgtcaatgcaaaa
gacatgctgaagatgactgcccttcattgggcaacagaacatggttaccaggaagtagtg
gaccttttaataaaatacggggctgatgttcatgttcagagcaaattttgcaaaaatgcg
ctggacatagcaattgataatgcaaatgaagaacttgcagaaatacttcaggtgtcaatg
caaaaccaaataaatacaaacccagaaagcccagatacagtaacaatacacacagcaaca
ccccagtttataattggtccaggtggggtagtgaacctgacaggcttggtttcagcagct
aactcctcaaaagatgaagcaggtgtgtccacagttcaatttggcaactcatcaacttca
gtattagctacattagcagctttagcagaagcatctgcacccttatccaattcaacagaa
actccagtagttgcaacagaagaagtcgtaactgctgactcagtggagggtgccattcaa
caagttgtcagctctggaggacagcaagtaatcacgatcgtcacagatggcattcagcta
ggcaatttacagacaggtgggatgggccagcccattattgtgacaatgccagacggtcaa
caagcatgtttctcagtcttaacagtccctgccacagacattgcagaagagactgtaatc
agtgaggagccatcagttaaaaggccgcgcatagaaatcattgaaaatcattccgaaacc
acagaaattgaggagaaagaaactttgcagaagcagttggaagaggctaatcgcgaggct
cagaaataccgccagcagctgcaaaagaaagaacaggaagccgaggcctacaggcagaag
ctggaggccatcactcgccaccaaagtaataaaaaagctgtatga
DBGET
integrated database retrieval system
