Polyodon spathula (Mississippi paddlefish): 121299352
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Entry
121299352 CDS
T07273
Name
(RefSeq) sodium/potassium/calcium exchanger 1-like
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
121299352
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121299352
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
121299352
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
121299352
NCBI-ProteinID:
XP_041082996
LinkDB
All DBs
Position
24:complement(13887452..13903361)
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AA seq
705 aa
AA seq
DB search
MYLHRRKRLQWNRIVFFLTGVLVCFAYQLSFSRRSAPWTRHDDADNVDSFLDVETRELSN
KTTADDTTDPPQTTTDHTPMTTDRTTIRHCIVVDPEPAKTTTIPTTATPVPNTTVLTNAS
STLLKIPHRTKGEYPEDIFTVEERRKGWVFLHIFGMIYMFVSLAIVCDEFFVPALGVITD
KLAISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCALF
SREMLHLTWWPLFRDVSFYILGLVLLIVFFLDNFIMWWESMMLLSAYVLYVVFMKYNVPV
EHFFKAQLNKHKSIVRVIALEEPGKSNGSAGGEDPPLPDDRNRRKVKPSLQRGGSSASLH
NSTMRNTIFQLMIHTLDPLAEETVFNGDFQPSASKHGQEKFKDKAEILNDMARGKVKSKG
QGKATGEDKGESPDPVNVQVAPPTEPSTSQPAKEEFKKDPPEGNETQEAGGSDSDEDSDE
DSDDEDSEEEEEEEDKEENDKPLSLEWPDNRRKQATYLFLLPIVFPLWLTVPDVRNAASK
KFFAMTFLGSIIWIAVFSYLMVWWAHQVGETVGISEEIMGLTILAAGTSIPDLITSVIVA
RKGLGDMAVSSSVGSNIFDITVGLPGPWLMYSLINGFTPVAVSSNGLFCAIVLLFLMLLF
VIFSIAICKWKMNKFLGCTMFALYFFFVVVSVMLEDRIIMCPVSI
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgcacaggagaaagaggcttcagtggaatcgaattgtctttttcttaacggga
gtgcttgtttgcttcgcctaccagctttcgttcagccggcggtcagcaccttggacaagg
cacgatgacgctgacaatgtggacagctttctcgacgtggaaaccagggagctctcaaac
aaaaccacagctgatgacacgacagacccccctcaaacaacaacagatcacacccccatg
accacagacagaactacaataaggcactgtatagttgtagacccagagccagctaaaacc
accacgatacctactacagcaaccccagtacccaacacaacagtcctaaccaatgcttcc
agcaccctactcaagatcccgcatcgcacgaaaggagaataccctgaggacatttttacg
gtggaggagcgtcggaaaggttgggtgttccttcatatttttggaatgatctacatgttt
gtgtccctagccattgtgtgcgacgagttcttcgtccctgctttgggggttatcaccgat
aagctggcaatctctgatgatgttgctggcgccactttcatggcagcaggcggctcggct
ccggagctcttcacctcgctcatcggggtcttcatctcgcacagcaatgtcgggatcggc
accatcgtgggctcggcggtgttcaacattctcttcgtcatcggcatgtgcgccctcttc
tcccgggagatgctgcacctgacctggtggcctcttttccgagatgtatccttttatatc
ctaggcctcgtcttgctcatcgttttctttctggacaacttcatcatgtggtgggagagt
atgatgctgctcagcgcttatgtgctttatgtggttttcatgaaatacaacgtgccggtg
gagcacttttttaaagcgcaactcaacaaacacaagagcattgtcagagttatcgcgctg
gaggaaccaggcaagagcaatggatctgctggaggggaggatccaccgcttcctgacgac
agaaacagacggaaggtcaagccatcactccagcggggtggcagctctgcctccctccac
aacagcactatgcgcaacacaatcttccagctcatgattcacacgctggaccctctggca
gaagaaaccgtctttaatggagattttcaaccttccgcttccaaacacgggcaagagaag
tttaaggacaaggctgagatcttgaatgacatggcaagagggaaggtaaagagcaaagga
caaggcaaagcaacaggagaagataaaggggaatcccccgaccctgtgaatgttcaggtc
gcccctcccacagagccgtccacatcccagccagccaaagaggaatttaaaaaggaccct
cctgaagggaatgagactcaggaagcggggggctcggacagcgatgaagacagcgatgaa
gacagtgatgatgaggacagtgaggaagaggaggaggaggaggacaaggaagagaatgac
aagcccctgtccctggagtggccagacaacaggcgcaagcaggctacctacctcttcctg
ctgcccattgtcttcccgttgtggctgaccgtgcctgacgtccgcaatgcggcctcgaag
aagttctttgcaatgacgtttctgggatccatcatctggattgctgtgttctcctacctc
atggtgtggtgggcccaccaggtcggagagacggtcgggatctcggaggagatcatgggg
ttgacgatcctggcagcgggaacgtccatccctgacctgatcaccagcgtcatcgtggca
cgcaagggtctcggagacatggccgtgtccagctctgtgggcagcaacatctttgacatc
actgtcggtctgcctgggccctggctgatgtactccttaatcaatggcttcaccccagta
gcggtgagcagtaacgggctgttctgcgccatcgtgctgctcttcctcatgctcctcttc
gtgatcttctccatcgccatctgcaagtggaagatgaacaagttcctgggctgcaccatg
tttgcactctacttcttcttcgtggtggtaagcgtcatgctggaggaccgcatcatcatg
tgccctgtctccatctag
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