Polyodon spathula (Mississippi paddlefish): 121299432
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Entry
121299432 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121299432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121299432
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121299432
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121299432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
WWE_5
zf-rbx1
zf-RING_2
zf-RING_11
zf-RING_5
zf-RING_Vps41
PHD_NSD
zf-ANAPC11
zf_RING_Vps8_fungal
zf-UDP
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
121299432
NCBI-ProteinID:
XP_041083049
LinkDB
All DBs
Position
25:16624892..16680292
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AA seq
622 aa
AA seq
DB search
MMLRPGSAMMIHVNGLGYAPQNLARVVVWEWLNEHGRWRPYSAAVCHHIENVLKGDSRGT
VVLGQVDPQLAPYIIDLQSMHQFRQDTGTMRPAQRNFYEPSSAPGKGVVWEWENDSGSWT
PYDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMTQTNRQSQRKRRLRRRMDLAYPL
TTGSIPKSQSWPVGTSSGQPCSCQQCILVNSTRAASNAILASQRRKVYTGANGTPGTLTL
VRQSNTFAGTTLWSPTSSVSRGSAKPEQVQSPGTGTTYPRVPALSAPTPASGQNNLNRPG
PQRFALVSTRGSIPPGVPALPVKNLTGSGPVHPALAGMTGILMCAAGLPVCLTRAPKPIL
HPPPINKGDIRPVPGVNGTCRKTKKKHLKKGKNPEDVVKRYMEKVKAVPDEDCTICMERL
TTSSGYDGVLSHKGIKSDLVGKLSKCGHIYHLLCLLAMYNNGNKDGSLQCPTCKAIYGEK
TGTQPPGKMEFHVIPHCLPGYPEFKTIRIVYDIPAGIQGTEHPNPGKKFSARGFPRHCYL
PDLEKGRKVLKLLIVAWDRRLIFTIGTSNTTGESDTVVWNEIHHKTEFGSNLTGHGYPDP
KYLGNVLAELSAQGVTDEVLKD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgcgtcctggatctgcaatgatgatccatgtgaacggactggggtatgcaccc
cagaacctggcccgggtggtggtgtgggaatggctgaacgagcacggtcggtggcgaccc
tacagcgctgccgtgtgccaccacatcgagaacgtgttgaagggggactcgcggggcacg
gtggtgctgggccaggtggacccacaactggccccttacatcatagacctgcaatcaatg
caccagtttcgacaggacacaggcaccatgcggcctgcgcagcgtaacttctatgagccc
tcttcggccccagggaagggggtggtgtgggagtgggagaacgacagcggctcctggacc
ccctacgacatggagatctgtgtgactatccagaacgcctatgagaagcagcacccctgg
ctggacctcacctcgctgggcttctgctacctcatcgacttcaacagcatgacccagacc
aaccggcagagccagcgcaagaggaggctgcgtcgcaggatggacctggcctacccgctc
accacgggctccatccccaagtcccagtcctggcctgtcggcaccagctccggccagccc
tgctcctgccagcagtgcatcctggtcaacagcacccgggccgcctccaacgccatcctg
gcctcccagcgccgcaaagtctataccggtgccaacgggacccccgggaccctcactctg
gtcaggcagagcaacacctttgcaggcaccactctctggtccccaacctcttcggtcagc
agaggctcagccaagccagagcaggtccagtccccaggtacgggaaccacctaccccagg
gtgcctgctctctctgcccccacccccgcctctgggcagaacaacctgaaccggcccggc
ccccagcgatttgccttggtgagcacgcgaggatccatcccaccaggggtccctgcactt
cctgtgaagaaccttactggctctggcccagttcacccagcattggcaggcatgactggc
atcctgatgtgtgcagcgggcctccctgtgtgtctgaccagggcccccaaacccatcctg
cacccccctcccatcaacaagggcgacataaggcctgttccgggggtaaacggcacctgc
cgcaaaaccaagaagaagcacttgaagaaagggaagaacccagaggatgtggtgaagaga
tacatggaaaaagtgaaggcggttcctgatgaggactgcacaatctgtatggagagactg
accacctcgtccggctacgacggggtgctcagccacaaagggatcaagtcggacctggtg
ggcaagctgagcaagtgtggccacatctaccacctgctgtgcctgttagccatgtacaac
aacggcaacaaggatggcagtctgcagtgccccacctgcaaggctatctatggtgaaaag
acaggcacacagccccctgggaagatggagttccacgtcatcccccactgccttcccgga
taccccgaattcaaaaccatccgcattgtctacgatatccctgccggcatccagggcacc
gagcacccaaatccagggaagaagttcagcgccagaggattccctcggcactgctacctg
ccggacttagaaaagggaagaaaggtcctcaagctgttgatagttgcctgggaccgccgc
ttgatctttaccatcggcacgtccaacaccactggggagtcggacactgtggtctggaat
gagatccaccacaagacggaatttggctccaacttgacaggacacggctaccctgacccc
aaatacctgggcaatgtcctggcggaactctccgctcagggagtgaccgacgaggtgctg
aaagactga
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