Polyodon spathula (Mississippi paddlefish): 121299435
Help
Entry
121299435 CDS
T07273
Name
(RefSeq) sodium-dependent neutral amino acid transporter SLC6A17-like
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121299435
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121299435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Gate
Motif
Other DBs
NCBI-GeneID:
121299435
NCBI-ProteinID:
XP_041083054
LinkDB
All DBs
Position
25:complement(4767414..4782362)
Genome browser
AA seq
732 aa
AA seq
DB search
MPKNSKVTQREHSNEHVTESVADLLALEEPLDYKSSVLNVGGMPPSPRKNKAVEEPQDPG
EERPAWNSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGGAYLIPYFILLIIIGIPLFFLE
LAVGQRIRRGSIGVWNYVCPRLGGIGFSSCMVCFFVGLYYNVIIGWSIFYFFKSFQYPLP
WSECPLVKNGSVSIVEPECDKSSATTYFWYREALDISNSISESGGLNWRMTLCLLAAWLV
VGMAMIKGIQSSGKVMYFSSLFPYVVLLCFLVRGLLLRGAVDGIAHMFTPRLEKMLEPQV
WREAATQVFFALGLGFGGVIAFSSYNKQDNNCHFDAALVSIINFVTSVLATLVVFAVLGF
KANLMNEKCVVENAEKIMGYLNSNVLSHDLIPPHVNFSHLTAQDYTEMYGVIRTVREGSF
SELGLEPCQLEDELNKAVQGTGLAFIAFTEAMTHFPGSPFWSVMFFLMLINLGLGSMIGT
MEGIITPIVDTFKVRKEIFTVCCCTMAFLIGLLFVQRSGNYFVTMFDDYSATLPLTIVVI
LENISVAWFYGTEKFMQDLTEMLGFRPSCFYFYMWKYVSPLCLVVLMFTSIIQMGLSPPG
YSAWNEETASERFLSYPSWALGMCFTLITLAMLPVPVVFIARQFHLLSDGSNTLSVSYKK
GRMMMKDISNLEDNDETRFILSKVPSEAPSPMPNHRSYLGPEGPSSMETTNTSPNSRYGT
GYLMPTTPESEL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaacagcaaagtgacgcagcgcgagcacagcaatgagcacgtcactgagtcc
gtggctgacctcctggcccttgaggagcccctggattacaagagcagcgtgctgaacgtg
gggggcatgccgccatctccgcgcaagaacaaggccgtggaggagccccaggacccgggg
gaggagcggccagcctggaacagcaagctccagtacatcctggcccaggtgggcttctct
gtggggctcggcaacgtgtggcgattcccctacctgtgtcagaagaacggaggaggcgcc
tatctgatcccgtatttcatcctgctcatcatcatcgggatcccgctcttcttcctggag
ctggcggtggggcagaggatccggcggggcagcatcggggtgtggaactacgtgtgccca
cggcttgggggcatcggcttctccagctgcatggtgtgcttctttgtgggtttgtattac
aacgtgatcattggctggagcatcttctatttcttcaagtcgttccagtaccccctgccc
tggagcgagtgccccctggttaagaatggatcagtgagcattgtggagccggagtgcgac
aagagttcggccaccacctacttctggtaccgcgaggcgctggacatctccaactccatc
tcggagagcggcggcctcaactggaggatgacgctgtgcctgctggcagcctggttggtc
gtgggcatggctatgatcaaggggatccagtcctcggggaaggttatgtatttcagctct
ctgttcccttatgtggtgctcctctgcttcctggttcgagggctgttgctgaggggggcg
gtggacggcattgcccacatgttcacacccaggctggagaagatgctggagccgcaggtg
tggagggaggcagccacgcaggtgttcttcgccctggggctgggcttcgggggcgtgatc
gccttctccagctacaacaagcaggacaacaactgccacttcgatgcagccctcgtctcc
atcataaacttcgtcacctccgtgctggccacgctcgtggtcttcgccgtgctcggcttc
aaggctaacctcatgaacgagaagtgtgtcgtggagaatgctgagaagatcatgggctac
ctgaactccaatgttctgagccatgacctcatccccccgcacgtgaacttctctcacctg
acggcgcaggattacaccgagatgtatggcgtgatcaggacggtgcgtgagggcagcttt
tctgagctggggctggagccctgccaactggaggacgagctcaacaaggctgtccagggg
acagggctggcgttcattgccttcacagaagccatgacacacttccctggctcccccttc
tggtcggtgatgttcttcctgatgctcattaacctggggctgggcagcatgatcggcacc
atggagggcatcatcacacccatcgtggacaccttcaaagtgcgcaaggaaatcttcacg
gtgtgctgctgcaccatggccttcctcatcggcctgctctttgtccagcgctcagggaac
tactttgtcaccatgttcgacgactactctgcaacgctgcccctcaccatcgtcgtcatc
ctggagaacatctccgtcgcctggttctatgggacagagaagttcatgcaggacttaacg
gaaatgctggggtttcggccgtcctgcttctatttctacatgtggaagtacgtctctccc
ctgtgcctggtggtgctcatgttcaccagcatcattcagatgggcctcagccctcctggg
tacagcgcctggaacgaggagacggctagcgagcggttcctgagctacccctcctgggcg
ctggggatgtgcttcaccctgatcaccctggccatgctaccagtgcctgtggtcttcatc
gcccgccagttccacctcctctccgacggctccaacaccctctccgtttcctacaagaag
ggacgcatgatgatgaaggacatatccaacctggaggacaacgacgagacccgcttcatc
ctcagcaaggtgcccagcgaagccccttcccctatgccgaaccaccgctcctacctgggg
cccgagggcccctcgtccatggagacgaccaacaccagccccaacagccgctacgggaca
ggctacctgatgcctaccacgccagagtccgagctatga
DBGET
integrated database retrieval system
