Polyodon spathula (Mississippi paddlefish): 121299506
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Entry
121299506 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: leiomodin-1-like
KO
K22030
leiomodin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121299506
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121299506
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121299506
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Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomodulin
LRR_6
WH2
Fim1C-like_C
Motif
Other DBs
NCBI-GeneID:
121299506
NCBI-ProteinID:
XP_041083191
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All DBs
Position
25:4258877..4265453
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AA seq
523 aa
AA seq
DB search
MSRCRRQVSEDPDIDNLLADLSPEEMKELEKELDVEDPDNKVPVGLRQRNQTDKHPSKYY
NRGAMLDYCERETKKLIERELSVEQGEEEPDSRESKDSKQEKPAECEPGKDNRKEDRLRR
MDRSREERSIRSSSKEAEEKSRQGTEKPEKDSKTGKEERTATKEDKKDTDEEQKRVESKS
RDESSTKTSKSENCPAEDVTDSPVSKLKEEEEEEKKEEEEEAAPSIYDETLEKIQNNDPE
LTELNVNNCEVIKTDMLIRFSEALKTNTFVKVFALANTRADDHVAIAIGAMLRTNKTIKS
VNLDSNHLTSKGISAVIRALQSNSTLTELRFHNQRHICGGKTEMEMAKILKENSTLLKLG
YHFELAGPRMTMTNILSRNIDKQRQKRLLEQKLAQGEGEKKGSLEVPKVEGFNKSSPRPS
PKSSPRSSPWSSPKVTSTSFYPPPQLRGGGVGGSWAELCPPMVLPPLNGENPRNSLSPIS
ERKLDGCSPPPAQEKNKRDQLLASIRCNNKKGLKKVEVPKLLL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggtgcagaaggcaagtgagtgaagacccagacattgataatcttctggccgac
ctctcccccgaggagatgaaggagctggagaaggagctggatgtggaggacccagacaac
aaagtgcctgtgggtttgaggcagagaaaccagaccgacaaacacccctcaaaatactac
aaccgaggagcgatgctggactactgtgagcgagaaaccaagaagctgattgagagagag
ctgtccgtcgagcagggagaggaagaaccagacagcagggaatccaaagacagcaagcag
gaaaagccagcggagtgcgagccggggaaagacaacaggaaagaggatcggctgagaaga
atggaccggagccgtgaggagaggagcatccgatcatccagcaaggaggcggaggagaag
agccggcagggcacagagaaaccagagaaggacagcaagacagggaaggaggaaagaaca
gcgacgaaagaggacaagaaagacaccgatgaggaacagaagcgcgtggaatccaaaagc
agagacgagtccagcaccaaaacctccaagtcagaaaactgccctgctgaagacgtgacg
gacagccctgtaagcaaactgaaagaggaggaagaggaggagaagaaggaggaggaggag
gaggctgcccccagcatctatgatgaaaccctggagaaaatccagaacaacgaccccgag
ctgaccgaactcaacgtgaacaactgtgaagtgataaagacggacatgctgatccgcttc
tccgaggccctgaagaccaacacctttgtgaaggtctttgccttggcaaacactcgggcc
gacgaccacgtcgccatcgccatcggcgccatgctgaggactaacaaaaccatcaagagc
gtcaatctcgattccaatcatctcaccagcaagggcatctccgccgtcatccgagccctg
cagtccaactccactctcacagagctgcgattccacaaccagaggcacatctgcggaggc
aagacggagatggagatggccaagatcctgaaggagaactccaccctgctgaagctgggc
taccacttcgagctggctggtcctcgaatgaccatgaccaacatcttgagcaggaacatt
gacaagcagaggcagaagcgactcctggagcagaagctggcccagggagagggggagaag
aagggctctctagaggtccccaaggtggaaggctttaacaagagctcccccaggccatcc
ccgaagagctcccctcgatcttccccctggtcctctccaaaggtcacctctacgagtttc
taccctcctcctcaattgagaggaggtggggtgggggggtcgtgggcggagctatgcccc
cccatggttttacccccgctcaacggggagaacccgaggaactccctgagccccatctct
gagaggaagctggatgggtgctccccaccccctgctcaggagaagaacaagcgcgaccag
ctgctggcctctattcgctgcaacaataagaagggtcttaaaaaggttgaggtaccgaag
ctattgctataa
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