Polyodon spathula (Mississippi paddlefish): 121299519
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Entry
121299519 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165-like
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121299519
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121299519
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121299519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
U-box_ZFPL1
zf-ANAPC11
zf-RING_16
zf-RING_Vps41
zf-Nse
Prok-RING_4
RINGv
zf-RING_10
zf-RING-like
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
121299519
NCBI-ProteinID:
XP_041083217
LinkDB
All DBs
Position
2:68129247..68159703
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AA seq
349 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGAHFNRHQHSHATSCRHFHLGPQSQMQTEFPHPHPGQTQP
GMNSHLPSAHQHATQLHQPLTPLAAPQFQDVPGPPFLPQALHQQYLIQQQLLEAQHRRIL
PHPRRIQDRVPIHPHRLRSGYNYPPTLHVPQPMGQQPRYLAEGTDWDLSVDAGSHPQYQV
RQLPQHYQHYLATPRMHHFPRNTSSAQVVVHEIRNYPYPQLHLLALQGINPTRHASAVRE
SYEELLQLEDRLGSVNRGAVQTTIERYTFPHKYKKRKPLELKLAMYDEEESDMDEKCTIC
LSMLEDGEDVRRLPCMHLFHQGCVDQWLATSRKCPICRVDIETQLTSDS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggttttagtgcatgttggatatctggttcttcctgtttttggctctgtaagaaacaga
ggtgcccattttaacaggcatcagcacagccatgctacctcctgccgacacttccacctg
ggtccccagtctcagatgcagactgagtttccccaccctcaccctgggcagacccaacca
ggcatgaactcacacctgccatctgctcaccagcatgccacacagctccatcagcccctg
acacccctggcagccccgcagttccaagacgtaccaggacctcctttcctacctcaggct
ttacaccagcaatacctcatccagcagcaactactggaggcccagcacaggaggattctt
ccacaccccaggcggattcaggatcgagtgcccattcacccacacaggctgcgctccggc
tacaactacccccccaccctgcatgttccccagccaatggggcagcagccaaggtacctg
gcggaaggcaccgattgggacctcagtgtggatgcagggtctcaccctcagtatcaagtc
aggcaacttccccaacactatcagcattacttggccactcctagaatgcaccactttcca
agaaacacatcatcagcacaagtggttgttcatgaaatcaggaattatccctatccgcaa
ctgcacctgctagccctgcaaggaatcaaccctacaagacatgcttcagcagtaagggaa
agttatgaggaactgttgcagctagaagacaggctgggaagtgtgaaccggggagcggtc
cagaccactatcgagagatataccttcccacacaagtataagaagagaaaaccgcttgaa
ttgaaattagccatgtatgacgaggaggagtcagacatggatgaaaaatgcacaatctgt
ctttccatgctggaagatggagaggacgtcaggaggctaccttgtatgcatctcttccat
caaggctgtgtggatcaatggctggccaccagtaggaagtgccctatttgccgagtggac
attgaaacacagctgacgtctgacagctga
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