Polyodon spathula (Mississippi paddlefish): 121299609
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Entry
121299609 CDS
T07273
Name
(RefSeq) tubulin alpha-8 chain-like isoform X1
KO
K07374
tubulin alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04145
Phagosome
pspa04210
Apoptosis
pspa04517
IgSF CAM signaling
pspa04530
Tight junction
pspa04540
Gap junction
pspa04814
Motor proteins
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121299609
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121299609
09143 Cell growth and death
04210 Apoptosis
121299609
09144 Cellular community - eukaryotes
04530 Tight junction
121299609
04540 Gap junction
121299609
09142 Cell motility
04814 Motor proteins
121299609
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121299609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121299609
03036 Chromosome and associated proteins [BR:
pspa03036
]
121299609
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121299609
04147 Exosome [BR:
pspa04147
]
121299609
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121299609
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121299609
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121299609
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121299609
Exosomal proteins of other body fluids (saliva and urine)
121299609
Exosomal proteins of colorectal cancer cells
121299609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121299609
NCBI-ProteinID:
XP_041083364
LinkDB
All DBs
Position
25:2036647..2042437
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQMGNACWELFCMEHGVQPDGVIPSDNEKAGFPGDSLHTFFSAGSSG
RHVPRAIFVDLEPTVVDEIRTGPYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVL
ERVRKLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQIST
AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYNNLNRLIGQIVSSIT
ASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNACFEPA
NQMVKCDPRHGKYMACCMLYRGDVVPKDVNMAIAAIKTRRSIQFVDWCPTGFKVGINYQP
PTVVPGADLAKVQRAVCMLSNTTAIAEAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFS
EAREDLAALEKDYEEVGADSTEGDEDGDEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgcatctccatccacgtgggccaggcaggagtccagatgggcaatgcctgc
tgggagctcttttgcatggagcatggggtgcagccagacggggtgattccgtcggataac
gagaaagccggcttccctggagactccctgcatacctttttcagcgcgggcagttcgggc
cggcatgtcccaagagctatattcgtggacctagagcccaccgtggtcgacgagatcagg
acgggaccctacaggcagcttttccacccggaacagctgatcaccggcaaagaggatgct
gctaacaactatgccaggggccattacactgtgggaaaagagattatagatctggtgctg
gagcgagtcaggaaactgtctgaccagtgcactgggctgcagggcttcctgatcttccac
agcttcggaggtggaaccggttctggtttcacctccctgctgatggaacgcctgtctgtg
gactacggcaagaagtccaagctggagttcgccatctacccggccccccagatctccacg
gctgtggtggagccctacaactccatcctgaccacccacaccaccctggagcactcggac
tgcgccttcatggtggacaacgaggccatctacgacatctgcagacgcaacctggacatc
gagcggccgtcctacaacaacctcaaccggctgatcgggcagatcgtctcgtccatcacc
gcctccctgcgcttcgacggggccctcaacgtggatctcacagagttccagaccaacctg
gtgccgtacccccgcatccacttccccctggtcacctacgcccccatcatctcagccgag
aaggcgtaccacgagcagctgtccgtgtccgagatcaccaacgcctgcttcgagcccgcc
aaccagatggtgaagtgtgacccgcgccacggcaagtacatggcctgctgcatgctgtac
cgcggcgacgtggtgcccaaagacgtcaacatggccatcgcagccatcaagaccaggaga
agcatccagtttgtggactggtgccccactggattcaaggtcggaatcaactaccagccc
cccactgtggtcccaggggcagacctggccaaggtgcagagggctgtgtgcatgctgagc
aacaccacggccatcgccgaggcctgggcccggctgaaccacaagttcgatctgatgtac
gccaagcgggccttcgtgcactggtacgtgggggagggcatggaggagggggagttctcc
gaggccagggaggacctggcagcgctggagaaggactacgaggaggtgggagcagactcc
actgagggagatgaagacggagacgagtactga
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