Polyodon spathula (Mississippi paddlefish): 121299627
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Entry
121299627 CDS
T07273
Name
(RefSeq) ARF GTPase-activating protein GIT2-like isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121299627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121299627
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121299627
Endosome - Golgi transport
Arf GTPase associated proteins
121299627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
ArfGap
GIT_SHD
GIT_CC
Ank_2
Ank
Ank_5
Ank_4
Talin_IBS2B
Ank_3
TTRAP
Exo70_N
Sen15
T7SS_ESX_EspC
Motif
Other DBs
NCBI-GeneID:
121299627
NCBI-ProteinID:
XP_041083404
LinkDB
All DBs
Position
25:complement(20345846..20366998)
Genome browser
AA seq
680 aa
AA seq
DB search
MSKRLRSSEVCADCSVPDPRWASVNRGVLICDECCSVHRSLGRHSSQVRHLTHTPWPATQ
LQMVQTLYGNGANSIWEHSLLDPASIMSGKRKANPQDKVHPNKAEFIRAKYQMLAFVHRM
PCRDEDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQI
LQAELLTVYGADPGAPDASGKTPIDYARQAGHQDLADRLVEIQYELTDRLAFYLCGRKPD
HKSGQHFIIPQMADSSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLA
TQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQLGS
SVSSPKENIELILKNIGSRHGSESQDNDQPDYDSVASDEDTDLEPSSVKTNRAKVMQSVD
SDLSDGPITVQEFMEVKNALTASEAKIHQLMKVNSNLSDELRLMQKKIGRSAFVTSSSSL
PSFPSTLSWSRDENARRASKLEKQSSMPDSDYDNTPNDSELDDTGCNRKGKLRTSGWHGG
GSIPELDQDLEAEPDSTLPSTEDVIRKTEQITKNIQELLRAAQEDKHDSFIPCSERIHIA
VTEMAALFPKKPRSEMVRASLRLLTSSAYRLQSECRKTLPVESGPDADMQLVTQQVIQSA
YDIAKAAKQLVTITTKENSN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcggttgcggagcagtgaggtttgcgcagattgcagcgtcccggacccgcgc
tgggcctctgttaaccgtggagtgttaatctgtgatgaatgctgtagtgtgcatagaagt
ttgggacgacacagctctcaggtgcggcatctaacacacacgccctggcctgccacacag
ctacagatggtgcagacgttgtatggtaatggtgcaaattcaatatgggagcattccctt
ctggatcctgcatcaataatgagtggcaagcgtaaggccaacccacaggataaagtacac
ccaaacaaagcagagtttataagagccaaataccagatgctggcatttgtccatcggatg
ccatgtcgggatgaggacagcgttacagccaaggacctcagtaagcaacttcattcaagc
gttcggactgggaacctggagacgtgtttgaggttactctcccttggagcccaggcaaac
ttctttcacccagagaaaggaaacactccccttcatgttgcagcaaaagcagggcagatt
ttacaagctgagcttttaactgtgtacggtgccgatcctggggctcctgatgctagtggc
aaaaccccaattgactatgcaaggcaagctggacatcaggatcttgcagatcggttggtt
gaaatccagtatgaactcactgacaggctagcattctacctctgtgggagaaagccggat
cataaaagtggacagcactttataattcctcaaatggcagacagcagtctcgacttatct
gaattggcaaaagctgctaagaaaaagcttcagtctctaagcaatcacttatttgaagaa
ttggccatggatgtctacgatgaagttgatagaagggagaccgatgcagtgtggctagca
acacagaaccacagcaccctagtaaccgagactacagttgtgcctttccttcctgtgaac
ccagaatactcctcaaccaggaaccaggggagacagaaacttgcaaggttcaatgctcac
gaatttgcaacccttgtaattgatattttaagtgatgccaaacgtcgacagctaggaagc
tctgtttcaagccctaaagaaaacatagagctgatactgaagaacatagggagccgacat
ggaagtgaaagtcaggacaatgaccagcctgattacgacagcgtggcttcagatgaggat
acggatctggagccatcgtcggtgaaaacaaaccgggccaaggtaatgcagagcgtggat
tcagacttgtcagatgggccaatcacagtgcaggagttcatggaggttaaaaacgcactg
acggcatcagaagcaaagattcaccagctaatgaaagtgaacagcaacctgagtgatgaa
ctgaggctgatgcagaaaaagattgggaggagtgctttcgtgacctcctcttcatctctc
ccttccttcccttccacgctctcctggtcgcgggatgagaatgcacgaagggcctctaaa
ctggaaaagcaaagcagcatgccagacagcgattatgacaacacaccaaatgactctgaa
ctggatgatacaggatgcaatcgaaagggcaagctgagaactagcgggtggcatggagga
ggctccatccctgagctggatcaggacctggaagcagagcctgactccaccctgcccagt
acagaggacgtcatccgtaaaaccgagcagatcaccaagaacattcaggagctgctgcga
gccgcacaagaggacaaacatgacagttttataccttgttcagaaagaatacacatcgct
gtaaccgaaatggctgccctctttcccaagaagccgcggtcggagatggtccgagcctca
ctcaggctgctgacttcaagtgcttatcgtctgcagtcagagtgcaggaagaccctgcct
gtggagagcggtccagatgctgacatgcagctggtcacccagcaggtcatccagtctgcc
tatgacatcgccaaggcagccaagcaactggtcaccatcaccaccaaagagaacagcaac
tga
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