Polyodon spathula (Mississippi paddlefish): 121299692
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Entry
121299692 CDS
T07273
Name
(RefSeq) leucine-rich repeat neuronal protein 2-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121299692
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121299692
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_5
Ig_3
LRR_1
LRR_9
ig
LRR_14
LRR_EndoS
Ig_2
V-set
LRR_NXF1-5
LRR_LRWD1
LRRNT
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
121299692
NCBI-ProteinID:
XP_041083557
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All DBs
Position
25:6894502..6896720
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AA seq
711 aa
AA seq
DB search
MKYIAMRLLQVHLLLGVTSALVIQSVPWKVPCPRQCVCQIKPWYSPRSVYKEAPTVDCND
LLLSRLPDSLPAETQTLRLQSNLISSLDQTELQRIANLTELDLSQNSFTSARDLRIAGMP
RLLSLHLEENQFRHLPEAAFSGFPGLQELYLNHNQLRNISPGAFTGLDNLLRLHLNSNRL
RAVDRRWFHALPHLEVLMIGGNPVEVIQDQNFKPLGSLRSLVLAGMGLRELSEWALEGLA
SLESVSFYDNRLTKVPKEALQKVPGLKFLDLNKNPIQLVLPGDFRDMLHLKELGLNNMDE
LVSIEQSALENLPELTKLEITNNPRLSYVHPQAFQRLSSMESLMLNSNALSALHRQTIRS
LPGLQEISLHTNPIRCDCLIRWVGAEDDRSVRFIEPQSTFCSEPPELKARRVKEVSFREM
ANSCLPLIAPGTFPSHARVRLGETLSLHCRALAEPEPSIYWVSPTGQRLSPSESYGRYKV
GSEGTLEVFGVTLEEAGLYTCVAQNLVGADTRSVAVKVIGVGKSLISSNKRGGNSIILQA
REVSTRYALVSWPSRQNVPSAWLSWLDNRSAEGQHSARLLAGTRGFNLTHLRPNTQYRVC
LHLGPDDTSCLHLRTKEATATAVSPDLTPAALLATSALLLLLAVKACQGGPSSCLKEEDC
PWQEQSEKPSVCSPVPTAGECHLDMQQSQTQSSDKDCGSVDNVQNIQPQSC
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattgcaatgagacttctgcaagtccacctgctcctaggagtcaccagcgct
ctggtcattcagtctgtgccctggaaggtcccttgtcctcggcaatgtgtgtgccagatc
aagccctggtattctcctcgctcggtttataaagaagcccccacagtggactgcaatgac
ctcctgctctctcgcttgccagattccctgcctgccgagacccaaactcttcggctgcag
agcaatctgatcagctccctcgaccaaacagagctccagaggatagcaaacttgaccgaa
ctcgatctctctcagaacagcttcaccagcgcacgagacctacgcatcgctggaatgccc
agactcctcagtctgcatctggaagagaaccagttccggcacctcccagaggctgccttc
tcaggtttcccaggcttgcaggagctgtatctcaatcacaaccagctgaggaacatctcc
cctggggctttcaccggcttggacaaccttctccgacttcatctcaactccaaccgcctt
cgcgcggtcgaccgccgctggttccatgccttacctcatctggaggtcctgatgatcgga
ggcaaccctgtggaagtcatccaagaccaaaatttcaagccactggggtccttacgcagc
ctggtcctggctggcatgggcctgagagagctctcagagtgggcattagaaggattagcc
agtttagagagtgtttcattctatgataaccgtctaaccaaagtacccaaagaggccctg
cagaaggtacctgggttgaagttcctggacctgaacaagaacccaatccagctggttctg
cctggagacttcagggatatgcttcatctgaaggagctaggactgaacaacatggacgag
ttagtttccatagagcagtcagccctagagaatctgcctgagctaaccaaactggagatc
accaacaatccacgactatcttatgtccacccacaggctttccagcgcctgtccagcatg
gagagtctgatgcttaatagcaatgccttgagcgctttacacagacagaccatacgttcc
ttacctggtctccaagagatcagtctgcacaccaacccgatccgttgcgactgtctgatc
cgttgggtgggtgctgaagacgataggtctgtccgcttcattgagcctcaatccacgttc
tgctcagaaccgccagagctcaaggcaagaagggtgaaggaggtctcttttagagagatg
gccaacagctgcttgcctttaattgccccaggaacttttccttctcatgcacgggtcagg
cttggagagaccctgtctctacactgtcgggccttagcagaaccagaacccagcatctac
tgggtctctcccacaggccaaagactttccccatctgaaagttatggacggtacaaggtt
ggatcggagggtactctggaggtctttggagttaccctagaagaggcaggtctttacact
tgtgtggcacagaatttggttggggccgacacccgcagtgttgctgtgaaggttatcggg
gtcgggaagtctttgataagtagtaacaagagaggcggtaatagcataattctgcaggca
cgggaagtctcaacacgatatgctctggttagctggccatctagacaaaacgttccatca
gcatggctgtcctggttggataacagaagtgctgaaggccaacacagtgcccgactgcta
gcgggaactcgaggctttaacctgacacacctgagacccaacacccagtacagagtgtgc
ctgcaccttggtccagacgatacctcctgtcttcatctcaggactaaagaagccacagca
actgctgtatctccagacctgacccctgcagctctacttgcgacctctgctttgctcctg
ctgctggcagtcaaagcttgccaaggagggccctcttcctgcctgaaagaagaggactgc
ccatggcaggaacaatcagagaagccaagcgtctgctccccagtgcccacagcaggagag
tgccatctggacatgcagcagtctcagacgcagagctcggataaagactgcggcagtgtt
gacaatgttcagaacattcagccacagtcgtgctga
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