KEGG   Polyodon spathula (Mississippi paddlefish): 121299698
Entry
121299698         CDS       T07273                                 
Name
(RefSeq) ataxin-2-like isoform X1
  KO
K23625  ataxin 2/2L
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspa03019]
    121299698
Messenger RNA biogenesis [BR:pspa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121299698
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 121299698
NCBI-ProteinID: XP_041083566
LinkDB
Position
25:17323900..17353648
AA seq 1112 aa
MSMKQAGGNRKPGNSSSGGPAAASGAGGSGGSGGRQNMGRGRSSGKGPPPATIPFDGVYA
NMRMVHVLTSVVGTKCELKVKNGIIYEGVFKTYSPKCDLVLDAAHRKSPDSGLCPKREDI
LESIIFKASDVVVVQFKDVDLNYARKVSSETDAFTDPTVNARINGEHKDLEPWDSGESVN
EDLEALETDVSNGWDPNDMFKFNEENYGVKSTYDSSLSSYTVALERDTSEEFLKREARAA
QLADEIESSASYKARVAVENDDRTEEDKYTAVARNSEREGHSMNSRENKYIPPGQRNRDG
MSWGTGRQNSPRMAQPGSGPPPPRTGAHNSDYSPSSGADQRVVNGGVPWPSPCPSPSSRP
PSRYQSAPTSLPPRAATPTRPPSRPPSRPSRPPSRPSAHGAPVPFSTMPKRMSTEGPPRM
SPKTQRTPRGHRGSTGRVGMGVEFIPHSAPAEVSPPPAPRSSPSGGTWSAVVSGGSSSRL
SPKVHRPKSPRQNSIGSASSGSSLPSPQAGTVPVESVAMPVSAMSPTAASPASNRAVTPS
AEAKESRLQEPRQNSPAANKENHKPSETSPSFPRPANKGASVPPDHRQQIDNLKKFSEDF
RLQPSSNPDPVFDQLMSQPRDPAEKSRESHLDKTAETSSKESASEDGSAPNTTGSSNSSS
KPSSPSTSPSAVCSSEQKRGPDVTSQGVQTSGPGNKLDTDDKKDTTPEQVRKSTLNPNAK
EFNPRSFSAQPKPATTPTPPRPQGQPSPSIVVQQHPTLYSPTVCFPQMYPLPVSPGVQKS
IVWKPTAMYHVPVTHMPVNQTKPYRAGKVPNMSQQRPDQHHPPGTPTMIHPATAAGPPIV
APNPAYSAQYVTYSPQQFANQPLVQQVPHYQSQPPHVYSPVLQSNGRMMAPPTHGQPGLV
SSSTTQYGASEQTHTMYVSQGPIPQQYTHPNATLHHHPQHPQPSATPTGQQQGQHAGSHP
APSPVQFMYLLKQHAQHQAAQALHLGNPQQQPIYSTLTPTPPSMTPGPNPQSPQTSFPSA
QQAVYIHPQQMQHGYNPSHMAHVPQAHVQSGMVPPHHATPTHPPMMLMATQPPGGPQPPI
PQNALPPIPVSSTTHFSYMAHPTVQAHHQQQL
NT seq 3339 nt   +upstreamnt  +downstreamnt
atgtcaatgaagcaggccggaggtaaccgaaaacccggcaacagcagcagcggcggcccg
gctgcggcctctggcgccgggggaagcggggggagcggcggacggcagaacatgggcaga
gggcgcagcagcggaaaaggtcctcccccagctacaattccttttgatggtgtttatgca
aacatgaggatggtacatgtcctaacatcagttgtaggaacaaaatgtgaattaaaagta
aaaaatggaattatttatgaaggagtttttaaaacctacagtcccaagtgtgacttggtg
cttgacgctgctcaccgcaagagtccagattctggtctctgcccaaagcgtgaagatatt
ctggagagtataatttttaaggcatcagatgtcgttgtggtgcagtttaaagatgtagac
ttgaattatgcaagaaaagtttcttcagaaacagatgcattcacagatcctactgtcaat
gctagaataaatggtgagcacaaagacttggaaccatgggacagtggtgagagtgtcaat
gaggacctagaggccttggagactgatgtgtccaatggctgggatccaaatgacatgttt
aaatttaacgaagaaaactatggggtaaaatcaacttatgacagcagtctctcctcatat
acggtggctctagaaagggacacttctgaagagtttctgaagcgggaagccagagcagcg
caactcgcagatgagatcgagtcaagcgcctcgtataaagccagagtggctgtggagaac
gatgatcgcacagaagaggacaaatacacagctgtggcaagaaactctgaaagagaagga
cacagcatgaactccagagaaaataagtacattccaccgggacagaggaatagggatgga
atgtcctggggcactgggagacagaattctccaagaatggcccaacctggctccggaccc
cctcctccccgcactggagctcacaactcggactacagtcccagctcaggagcagaccaa
agagtggttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgccca
ccttctcgttaccagtcagcccccacctctcttccgcctcgtgcagccactcccaccagg
ccgccctccaggcccccctccaggccctcgcggcccccgtctcgcccctctgctcatggt
gctccagttcctttctctactatgcctaaacgcatgtctacagaaggtcctccaaggatg
tctccaaagacccagcgcacccctcggggacacagaggttccactggaagggttggcatg
ggtgtggaattcataccccacagtgcacctgcggaggtgtctccccccccagcaccacga
agcagcccctcgggcggaacctggtcagcggtcgttagtggaggttcaagctcccggtta
tctcctaaagtacacagacccaagtctccaaggcagaacagtattggaagtgcttccagt
ggatcatctcttccctctcctcaagccggtactgttcctgttgagtctgtagccatgccg
gtttctgccatgtctcccacagcagccagtcctgcatccaacagagcagtcaccccatct
gcagaagctaaagaatccagacttcaggaaccaaggcaaaattcccctgctgcaaacaaa
gaaaatcacaaaccgagcgaaacctctccaagcttcccaagacctgctaataaaggtgct
tctgtgcctccagatcatagacaacaaatagataatttaaagaaattcagtgaagacttt
agattacagcccagttcaaatcctgatcctgttttcgaccagttgatgagccaacctcga
gaccctgcagagaagtccagggagtcccacctggataagactgcggagacgagtagtaag
gagtctgccagcgaggacggctctgcccccaacaccaccggcagcagcaacagcagcagc
aagcccagcagccccagcacctccccgtcagctgtgtgcagctcggagcaaaagagagga
ccagacgtcacctcccagggcgtccagacctccgggccaggcaataagctggacacggac
gacaagaaagacactaccccagagcaagttagaaaatcaacactgaatcctaatgccaag
gagttcaaccccaggtcattctctgctcaacccaaacctgccactacacccactccccca
cgccctcaaggccagcctagcccttcaattgtggtgcagcagcatcccacgttgtatagc
ccaacagtgtgcttcccacaaatgtacccccttcctgttagcccaggagtgcagaaaagc
attgtctggaagcctactgctatgtaccatgtcccagtgactcatatgccagtaaaccag
acgaagccctatagagcaggtaaagttccaaacatgtcccagcagaggccagatcagcat
caccctccgggcaccccaaccatgatccaccctgccactgcagcagggccacctatcgtg
gctcccaatccagcgtactctgcacagtatgtgacctacagccctcagcagttcgccaac
caaccccttgtgcagcaagtaccacactatcagtcacagcctccacatgtctacagccct
gtgttgcagagcaatggcaggatgatggctcctccaacccatgggcagcctggcctggtc
tcctcctcaacaacacagtacggtgcttcagaacaaactcacacaatgtatgtgtcccag
ggtcctatcccccagcagtacactcaccccaatgccaccctgcaccatcatccccagcac
ccacagccctctgccaccccgactgggcagcagcaaggacagcatgctggcagccaccct
gcacccagccccgtccagtttatgtatttgttaaaacagcacgcccagcaccaggcggct
caggctcttcacttggggaacccacagcagcagcccatctactccacgctgacccccacc
ccaccctccatgacgcctggtcccaacccgcagtctccacagaccagcttcccctcggct
cagcaggcagtctacattcacccccagcaaatgcagcacggttacaacccctcgcacatg
gcacatgtacctcaggcccatgtgcagtctggaatggtaccccctcaccatgccacccca
acacacccacctatgatgctgatggcgacgcagcctccggggggtccgcagcctcccatt
cctcagaatgcattgcctcccattccagtctcctcaaccacgcacttctcttacatggca
caccccacagtgcaagctcatcatcagcagcagttgtag

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