Polyodon spathula (Mississippi paddlefish): 121299762
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Entry
121299762 CDS
T07273
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome homolog isoform X1
KO
K28154
splicing regulator ARVCF
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121299762
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121299762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Arm_2
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
121299762
NCBI-ProteinID:
XP_041083718
LinkDB
All DBs
Position
25:complement(22839635..22954491)
Genome browser
AA seq
1031 aa
AA seq
DB search
MDEYDVRSAASILASVKEQEARFEHLTRALEEERRNVSLPSERLSMCNAGSSSQPLAWQQ
IVLQERSPSNQTSRAMMQEPPEVLEETVTIEEDPGTPTSHVSVVTSEDGTTRRTETKVTK
VVKTITRRTFHPVTVTERLLDSRPDTPTPETDPVTKMVKTVTTRTVRQVPLGPDGLPIPD
GSSPLGSYTDSIDRRYLKNGDRYITPQATSTLTRSFNNYSDSYSDSPDNQHRHYSIHDSY
ADMSDNYGSLSRGVNYRPRYGYMPANYRPENSYTLPIRKEDYGHIAQPQVPLGSSAELNR
SQPERFQPEPYGLEDDRRSLGPEEEEAYDLEPDYSTANRRTLTTADRGRPGREPIRERIG
EPMMRDPVRGRVCYEDPIEAELIDERHPYLQGIYTAPLAQPERGSMASLDRMGRHSPSID
SMRKDPRWRDPDLPEVIAMLGHPIDPVKSNAAAYLQHLCYENDRIKKDVRHLKGIPILVG
LLDHPKPEVHRKACGALRNISYGKDNDNKVSIKNCDGIPALVRLLRKTSDMEVRELITGT
LWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWEHEPNEDSKPRDAEWTTVFKNTSGCLR
NVSSDGAEARRRLRECGGLVDALLHALQSAVGKKDMDNKSVENCVCIMRNLSYHVHKEVP
GAENFLEPAANQSGGTGALQKKKKDDAGCFGGKKAKEEWFDQGRKNGENDKNYDTLDLPK
RTEPTKGFELLYQPEVVRLYLSLLTESQNYNTLEAAAGALQNLSAGQWTWSMYIRATVRK
EKGLPILVELLRSDSDKVVRAVAIALRNLSIDRRNKDLIGSYAMRDLVSNLPSGQQRPAK
NLEEDTVVAILNTTHEIVTDSSENARSLVQAQAIEKLVAINKTSQSSRETKAASHVLQMV
WSYKELRNALHKEGWNKTHFQPAAAAPPKGSKSGGKPGYDDSTLPLMEKNQGNKKSGSAD
MIPMDELGPDAYSTIDHKESRYKTRDGSRDVAERDPLKNDTNRKNFIRSNRPTVNLVDGF
DTEHQPVDSWV
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtatgacgtgagatcagccgctagcattctagcctcggttaaagagcaggag
gctcgcttcgagcatctgacccgggccctcgaggaggagcggcgcaacgtcagcctgccc
tcggagcgactgagcatgtgcaacgctggcagcagcagccagcccctggcgtggcagcag
atagtactgcaggagcggagccccagtaaccagacctccagagccatgatgcaggagcct
ccggaggtgctggaggaaacagtgactattgaagaggacccgggaacgcccacctcccac
gtttccgtggtaacgtcggaggatggaactactcgccggactgagacaaaggtgaccaag
gttgttaaaaccatcactcgccgcaccttccacccggtgacagtaacagagaggctgctg
gattcccggccggacacccccactccggagacagaccctgtcaccaaaatggtgaaaacc
gtgaccaccaggacggtgcgccaagttcccctggggccagatggcttgcccatcccggac
gggtcttcccctctcggcagctacacggattccatcgaccggaggtacctgaagaacggg
gaccgctacatcaccccacaggccacctccaccttgaccagatccttcaacaactacagc
gattcctacagcgacagccccgataaccagcaccggcactacagcatccacgacagctac
gctgacatgtccgacaactacggcagcctttccagaggggtcaactaccggcctcgctat
ggctacatgccagcaaactaccggccggagaacagctacaccctgcccatcaggaaggag
gactacggacacatagcccagccacaggtgcccttaggcagcagcgcagagctgaaccgc
tcccagccagagcgcttccagccggagccgtacggtttggaggatgaccggcgcagtctg
ggacctgaggaagaggaggcttatgacctggaaccagactactccacagccaataggagg
actcttaccactgctgaccggggcagaccaggcagggagccaatcagagagcgaatcggg
gagcccatgatgagagacccagttcgaggaagagtctgctatgaggatcccatagaggcg
gaactgattgacgagcgccacccctacctgcagggcatctacacagctcccctggcccag
cccgagcgaggcagcatggccagcctggaccgcatgggccgtcactcgccctccattgac
agcatgcgcaaagacccccgctggagggaccccgacctgccagaggtcatcgccatgctg
gggcaccccatcgacccggtcaagtccaacgcggctgcctatctgcagcatctctgctac
gagaacgacaggatcaagaaggacgtgcgccacctgaaggggatccccatactggtgggg
ctgctggaccaccccaagcctgaagtgcaccgcaaggcctgcggagccctccgcaacatc
tcctacggcaaggacaacgacaacaaggtgtccatcaagaactgcgacggcatccccgcc
ctcgtccgcctgctgaggaagaccagcgacatggaggtgcgggagctcatcacaggcacg
ctgtggaacctctcctcctatgaacccctcaagatggtcatcatcaaccacggcctgcag
accctgacaaacgaggtgatcatcccccactcgggctgggaacacgaacccaacgaggac
tccaagcctcgggacgcggagtggacaaccgtcttcaagaacacgtccgggtgtttgagg
aatgtgagttcggacggtgcggaggctcggcggcggctgagggagtgcggtggcttggtg
gatgcgcttctccatgctctccagtcagctgttgggaagaaggacatggacaataagtct
gtggagaactgcgtgtgcatcatgcggaacctgtcctatcacgtccacaaggaagtgcca
ggggcagagaacttcttggagcctgcagccaatcagagcgggggcacgggagcgctacag
aagaagaagaaggatgacgcagggtgtttcggggggaagaaagcgaaggaggagtggttt
gatcaaggaaggaagaatggagagaatgacaaaaactacgacactctggatctgcccaag
cgcaccgaaccaaccaaagggtttgagttgctttaccagccagaggtggtgcgtctgtac
ctgtcgcttctcaccgagagtcagaactacaacacgctggaggctgcagctggggctctg
cagaacctcagtgcaggacagtggacttggtcgatgtacatcagagctaccgttcggaaa
gagaaaggcctgccgatcctggtagagctgctgaggtccgactcggacaaggtggtgcgg
gcggtggccatcgctctccgaaacctgtccatcgaccgccgcaacaaagacctgataggc
agctatgccatgcgggacctggtgagtaacttacccagcgggcagcagagaccagccaag
aacctggaggaggacacggtggtggccattctcaacaccacccacgagattgtaacggac
agctcggaaaatgccaggtccctggtacaggcacaggccatcgagaagcttgtagccatc
aacaaaaccagccagtcttcgagagagacgaaggcagcctctcatgttctgcagatggtg
tggagctacaaggagctgaggaacgctctgcacaaggaaggctggaacaaaacacatttc
cagcccgcagcagctgcccctcccaaaggttcaaagagtggagggaagcccgggtatgat
gacagcactctaccattgatggagaagaaccaaggaaacaagaaatctggcagtgctgat
atgataccaatggatgaacttgggccagatgcatattcaacgattgatcacaaagagagc
aggtacaagactagagacggatcgagggatgtggcagaaagggatcctttaaagaatgac
acaaataggaaaaactttatcaggagcaacaggcccacagtgaatctggtggacgggttt
gatactgaacatcagcctgttgactcctgggtctaa
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