Polyodon spathula (Mississippi paddlefish): 121299769
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Entry
121299769 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34-like isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121299769
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121299769
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121299769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
ARMET_C
FYVE_CARP1-2
Prok-RING_4
zf-C3HC4_2
FYVE
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
121299769
NCBI-ProteinID:
XP_041083740
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Position
25:complement(19729310..19739951)
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AA seq
379 aa
AA seq
DB search
MKAGASSMWASCCGLLNEVMGTGVVRGQQPGFGAGAGPFRFAPNAGYSTYPPPSSGNASL
VCKACGLDFSVFRKKHVCCDCKKNFCSLCSALQENLRRCYTCNVLKETTFQRPQLMRLKV
RDLRQYLMLRNVSTETCREKEDLVDLVLFHHGSDAEDDLDTSSIRSSRSVLATPHSVLHS
APSQSSLSASPGDLLTWSGSSGTANQEHGDGAARLTLESDENVEAQDTPLSRKRARASLS
DISTMEDIEGLNVRQLKEILARNFVNYSGCCEKWELVERVNRLYRETEENRKSLENVDNS
KTAVVTSHPQPICSGGNGDGEKMHLSSDDNLCRICMDAVIDCVLLECGHMVTCTKCGKRM
SECPICRQYVVRAVHVFKS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctggggcctcgtccatgtgggcttcatgttgtggtctgctgaatgaagtgatg
ggtacgggagtagtgcggggccagcagccagggtttggtgcaggagccggtcccttcaga
tttgcccccaatgctgggtattcaacctaccccccgccttcatcgggaaatgctagtctc
gtctgcaaagcctgcggactagacttttctgtgttcaggaaaaagcatgtttgctgtgat
tgcaagaagaacttttgctctctctgctcagccctgcaagaaaaccttcggagatgttac
acgtgtaatgtactgaaagaaaccacattccagaggccacagctaatgagactgaaagta
agagacctgcggcagtatctaatgctgaggaatgtatcgacagagacgtgtcgcgagaaa
gaggacttggtggaccttgtgttgttccatcatggatccgatgcagaagacgacttggac
acaagtagtatacgttcatccaggtctgtgctcgccacgccgcattctgtattgcactcc
gctccgtcccagtcctcgctgtctgcctctccaggagatctgctcacttggagtggaagc
tcaggaacagcaaatcaggaacatggtgatggagcagctcggttgactctggaatcagat
gaaaatgtagaagcacaggatactccgctgtctagaaagcgggcaagggcctctctctca
gacatatccaccatggaggacatcgaaggactgaacgtccggcagctcaaagagatcctt
gctcgaaattttgtgaactattcagggtgctgtgaaaagtgggagctggtggagcgagtc
aacagactgtacagagagactgaagaaaaccggaagtcgttggaaaatgtggacaacagt
aaaactgcagtggtgacgtcacaccctcagcctatctgcagtggtggaaatggagacggt
gagaagatgcacttaagcagcgatgacaacctgtgcaggatctgtatggatgctgtgatt
gactgtgtactcctggagtgtggccacatggtcacctgtaccaaatgtggaaagagaatg
agcgaatgccccatctgtcgacagtatgtagtacgggcagtgcacgttttcaagtcgtaa
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