Polyodon spathula (Mississippi paddlefish): 121299774
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Entry
121299774 CDS
T07273
Name
(RefSeq) PDZ domain-containing protein 2-like isoform X1
KO
K24058
PDZ domain-containing protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121299774
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
121299774
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121299774
NCBI-ProteinID:
XP_041083754
LinkDB
All DBs
Position
2:70045061..70102215
Genome browser
AA seq
2359 aa
AA seq
DB search
MLRRIKRKAPLPPCNGAASGSEHRASVSSEPSGSPAHNGKRTRKFGVISRSSFTRDSKDS
SRDSGDSWHENGYCNSVEMEDSPRETVYPAEQHSEGNTSTEPPLYNGTSFPTVTSGLPRS
RLSDGGKTDSLNSEHPELPREGSRIWKMHMVKGQDGLGIQITGGRGSKKSPHGIIVTHVE
EGGAAQRDGRLKSSDELLMINGQSLVGLSHQEAVMILRSAAGLVQLVVASRESSQVDLQK
YPSTSLPDLVSTCSSQGSSPSPAENKENVNPDVEDVTASCLSLPTQDSLTEVDKIEDRGR
TEGPKGCCRSPTPMKFRSRSQGGGSRLESVGEDEELIVENEEAGCDVSEKLSRGGRKHSL
PQQLDTVGTREEYQIVKKSARSLSTVQVESPWRLAQPSIISNIVLMKGQGKGLGFSIVGG
QDSARGRMGIFVKTIFPSGAAAADGRLKEGDELLEVNGESLQGLTHQQAIQTFKQLKKGV
VTLAVRTRLRSPSLTPCPTPTLLSRSSSPNSNTSGGTPVPPCSEDGDGTCRKGPGPKDRI
VMEVTLNKEPGVGLGIGACCLTLGSPGIYTHSLAPGSVAKMDGRLSRGDQILEVDSVSLR
HVALSEAYAILSECGPGPVNLIISRHPNPKVSEQEMDEAIARPTHRESQSRDSHSSHVLG
LPSKSPSPTVKPKQSDGASSLSWTMKRFLEPASRQGSLSSEVELSQYFSHMPSQSSLSDT
MVTGSSDEELLRNKSCNTSLDDSSAPPLNPAFKEPASARMDVASTSPRSNGKNPANRHVE
AARQASLGGSPKSVRSPLLRQRRVICYEDEVSDEDEDLVQAEGPGAAVRFRRSLHVGGVE
EDSTIVIEGGARRILEQDSGIVMACSSVEVEDESQDSEAPAPLHGSSMESEDDLGAEQLQ
GGEFPSTPVRSLDHDAGGSNLGVKKEQHREGQLESKRSPKLEHKAVTRVKSMMNTECPHL
PQRQKNEEHHCQAGGKPVAKPLPHSKIPEAADSLGPGTTEMVRLTRKESESFGLDLEIKA
SPLRVLIAALRPGGAADRESMGKLSPGDELVSIGDTPVSSMSYQDMCNLMQTLPASLSLE
VKKPLSAVDRLSSLMMSSSPDGASHPDANKSLVTQEGPVEISEDASANKENVQSGLVLPP
ADEPSQLQVHLMDCSRSDLPVTDIDDFISELNSTEKTTHLNEDQSASKVNGPLDNRITQE
NNSKSGSTGSQQNRLGFSVLGAGNTGKFFTVSKTFLNSYSRNFSSLNEEELFSSKGADEC
MDTGPLKSMYCTVDESDSETDSAADPSPQAMRAVKCHANNEHGVLQITDSDEEQVEICYD
STHDSSTHCHSDKNNVQGRPFSLCHGIPDRANVNKVHSFAASREELPFTLQQRSTSKPAS
PPTKFKPTGAFSPSDKKDVASGSSRDNVSVSSDGLSSQECSKEVVIVSCDKEVGSDKSQP
TSPRQGDVNHSALMHTDSHLPPKTHSELYRSYSDALLTSHKSSNSHLFSQGSEPRCSPLG
NSTLGGGALTALTVKDRDQVKVNPSLGLKSSVSHIQNNSCQFSWVSGLKTQCESASAAHT
GRMKLQDKVQRSNTAPRLKGLSIKSKNKALDGSVTTKSTKVEVASQKKMSVSPLQSPKLH
PKKESLTYNLKTSKQLEKNSTGLPKPSGQKKDHRPPELERKGVEDHPSSNPAASDSAAQR
CEPLAGETQLARAAPYSQMTSPDKVQPETVTTQRSFIEVRLSSSSSPSSLASTPIIERRE
TPETNAVPAVGDASTKVLKDLDATRIFHKASGRSESLQEEQRSRAEAIGPCLNDKASQLD
KQDPCAFTEAGVEPEPHHSSSSSSTIIKQDDDGFKSSTTVEQNKSNRPKLEVLKTERRSY
SIESSLPLDHNSFSVRQRIKSFENLASFDKPVIRAIEIQSFTVTSKPPVGRRSSGSVTAS
AAGAHSMDGSRSLRRSLSSCADNSSEAPVTSPRLKKSPSTMALIGLESNPVENIRESHTE
EKALGVASVSEQDPVSQIPPVSHSRNPRGYSSLSRSRLRELRALSMPDLDKLCTEDFASE
ANTVTFKTELEIQPRRSLGAPAVRLTNLNRSVTPGSVSEEERDNDKKFSDNSWSISLSEL
SVSTLDQNKLQGVLTSLMCKTDVGTLMQQAKALAEGKEEVYFVVLTKEEGSGLGFSIAGG
VDLEQKCVTVHRVFARGIATLEGTIQRGDNIISVSGTPLGGASHGDALSVLHQARLRKQA
LVVIRRGKESEPLSPRQEVSASGGRRSQSARDVTMEAGTGPAVDLGDAIIVELQKTSAGL
GFSLDGGKASVHGDRPLYVKRIFKGGAAELSRVIEVADEVLAINGRTLEGLKHYDAWNII
KAVSEGPVQLIIRKHQASV
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtcgtatcaaacgcaaagctcctcttcctccttgcaatggcgctgccagcggc
agtgaacacagggcaagcgtctcctctgagccgagtgggagccctgctcacaatgggaag
aggacccggaagttcggggtcatctcccggtcctccttcacccgggacagcaaggacagt
agtagagacagcggagactcgtggcatgagaatggatactgcaactctgtggaaatggag
gactcgccaagagagactgtgtaccccgcggagcaacactcagaggggaacaccagcact
gagccaccactctacaacgggacctcctttccaactgtgacaagtgggctccccagaagt
cggctctcggatggcgggaaaacagactccctgaacagcgagcatcctgaactgcccaga
gaaggcagtcgaatatggaagatgcacatggtgaagggacaggatggactagggatccag
attactggaggccgcggatctaagaagtcccctcatggcatcatcgtgactcacgtggaa
gaaggaggagcagctcagagggatggaagactgaagtccagtgatgagttgctgatgatc
aatggccagtctctggttggcctctctcatcaggaggctgtgatgattctccgttctgcg
gcagggcttgtacaacttgttgttgccagcagggagtcatcgcaggtggatctccagaaa
tatccctcgaccagcctacctgatttagtgagtacctgctcgtcccagggcagctcccca
tcccctgcggagaataaagagaatgtgaaccctgatgtggaggatgtgacagccagctgc
ctctctctgcccactcaggactcgctcacagaagttgataagattgaggatcgaggaagg
acagagggacccaagggatgctgccgcagtccaacgccaatgaagttcagaagcagatct
caagggggagggagccgcttggagtcggttggagaggacgaggagctcattgtagagaat
gaggaggctggctgcgacgtgtcagaaaaactctcccgagggggccgtaagcactccctg
ccacagcagctcgacacagtgggcacccgggaggaataccaaattgtgaagaaatcagca
cgctccctaagcaccgttcaagtggagtctccatggcgactagcccagccgtctattatc
tccaatatagttctgatgaaagggcaaggcaagggtcttggcttcagtattgttggcggg
caggattcagctcgtggaaggatggggatttttgtgaagacaatctttcccagcggtgca
gctgccgctgatgggaggctcaaagaaggggatgaactgttagaagtgaacggagagtct
ctgcagggcctcacccaccagcaggccatccagaccttcaagcagctgaagaagggggtg
gtgaccctggcagtgcggactcggctgcgcagtcccagcctaaccccctgcccgaccccg
acccttctgagccgctccagctcccccaactccaacaccagtggggggaccccagtgcca
ccctgctccgaggatggagacggcacctgccgcaagggccccgggcccaaggaccgcatc
gtcatggaggtgacactcaacaaagagcctggagtgggactgggaattggggcttgctgc
ctgacgctgggatctccagggatctacactcacagcctcgctcctggctccgtggccaag
atggatggcaggctcagtcgtggagaccagattctagaagtggactcagtgagcctcagg
catgttgctctgagtgaagcctacgccattctcagtgagtgtggaccgggcccagtcaac
ctgatcatcagcagacaccccaacccaaaggtttcagagcaagagatggatgaagcgatt
gcacgccccactcatcgggaaagccaaagcagagacagccattcttctcatgtgctggga
cttccctccaagagtccatctcccactgtgaagcccaagcaaagtgatggggcctcctct
ctcagctggacaatgaaacgcttcctcgaaccagctagcaggcaagggtccctaagctcg
gaagtggagctctctcaatacttttcacatatgcccagccagtcatctctctcagatacc
atggtaaccggctccagtgatgaggaattgctccgcaacaagagctgcaacacctcattg
gatgacagctcagccccaccccttaacccagcctttaaagagccagcctctgccagaatg
gatgtggcctctacttctccacgcagcaacgggaagaaccctgcgaacaggcatgtggag
gctgcccggcaggccagtttggggggaagccccaagtccgtgcgcagccccctgctgagg
cagcgcagggtcatctgctacgaggatgaagtcagtgacgaggatgaggacctggtgcaa
gcggagggccccggcgctgccgtccgcttcaggaggtctttgcatgtgggcggggtagaa
gaggactctacgattgtgatagagggaggtgcccgcaggatactggaacaggactctggg
attgtgatggcctgctcctctgtggaagtggaggacgagagccaggacagtgaggctccc
gctcctctccacggcagctccatggagtcggaagatgacctgggggcagagcagctgcag
ggaggagagttcccctccacacctgtccgctccttggatcacgacgcaggcggcagcaac
ctgggtgttaagaaagagcagcaccgcgaaggccagctggagtccaagcgctcacccaag
ctggagcacaaggctgtcacccgggtcaaaagcatgatgaacaccgaatgtccacacctg
ccccagcggcagaagaacgaggagcaccactgccaagccggaggcaaaccggtagccaag
ccgctgcctcacagcaagatacctgaggctgcagactccttgggaccaggcactacagaa
atggtgcgactgacaaggaaggagtcggagtcctttggcctggatttggagatcaaggct
tctcctctcagggtgttgatagcggctttacggccaggaggtgctgctgatagggaatct
atgggaaagctgagtcctggagatgagctggtatcaataggagacaccccagttagtagc
atgtcatatcaggacatgtgtaaccttatgcagaccctgccagcttctctctcattagaa
gtaaagaagccactatctgctgtagacagactctccagcctcatgatgtcatcgagtcct
gatggagcatcccacccagatgccaacaagagtttggttactcaggaaggccctgtggaa
atctcagaggatgcatctgcaaataaagagaacgtgcagtctggattagttctgccacct
gcagatgagccctcacaattacaagtgcatttaatggactgcagtagaagtgatcttcct
gtcaccgatattgatgactttataagtgaactaaactctacagagaaaacaacacacttg
aatgaagatcagagtgcaagcaaggtcaatggtcctttggacaataggataacacaggag
aacaacagcaagtctggttctactggatctcagcagaatagactgggtttctcagttctg
ggcgctgggaacactggcaagttcttcactgtcagtaagacatttttaaatagctactcc
aggaacttcagcagtctgaatgaagaagaacttttcagttcaaagggtgctgatgagtgc
atggacacaggaccactgaaatctatgtactgtacagtagatgagagtgactcagaaaca
gactctgctgctgaccccagtccccaggccatgagagctgtaaagtgccatgctaataac
gagcatggggtactgcagattacagactcagacgaggagcaggttgagatctgttatgat
tcaacacatgactccagcacacattgtcactcagacaaaaacaatgttcagggcagacct
ttctcactttgccatggaatcccagacagggccaatgtaaataaggttcattcctttgca
gctagccgagaagaacttccgtttacactacagcagaggtccacttcaaagccagcctca
ccaccaactaaatttaagcctacaggtgccttttccccttcagataaaaaagacgtagcc
agtgggtcttccagagacaatgtatcggttagcagtgatggactctcctcacaagaatgc
agtaaagaggtggtcatagtttcctgtgacaaggaggtgggatctgacaaatcacagcca
acttcaccaaggcaaggtgatgtcaaccattctgccttaatgcacacagactctcattta
cctcccaaaactcacagtgagctgtataggtcatattcagatgccttacttacatcacac
aaaagtagcaattcacatctcttctcccagggcagtgaacctaggtgctcccctcttggt
aattccacactgggggggggggcattgacagcactgaccgttaaagacagagatcaggtt
aaagtgaatccttcccttggtttaaagtcatctgtttcacacatacaaaacaattcctgt
cagttttcttgggtctcgggtttgaaaactcaatgtgagagtgcaagcgcagcacacaca
ggtagaatgaaactccaagataaagtacagagatcgaacacagcacccagactgaaggga
ctcagtattaaaagtaaaaacaaggcactagatgggtctgtgaccacaaagtccacaaag
gttgaagtggcttcccagaagaaaatgtcagtgtccccgctgcagtcaccaaagcttcat
cccaagaaagaatctttaacatataacctgaaaacaagcaagcagcttgaaaaaaactca
acaggtttgccaaaaccgagtggtcagaagaaagaccacagaccgcctgagcttgagaga
aagggagtggaagatcatcccagttcaaatcctgcagcgagtgactcagcagcacaacga
tgtgaaccgttagcaggagaaacacagcttgcacgtgcagcaccatactctcagatgact
tcaccggacaaagtacagccagaaacagtgacgactcaaagaagcttcattgaagtaaga
ctgtcttcctcatcttcaccgtcatcattagcatcaacaccaattattgagcgcagggag
actccagaaacaaatgcagtccctgcagttggagatgcatctaccaaagtactgaaagac
ttggacgcaacaaggatttttcataaagcgtcaggaagaagcgagtctctacaagaagaa
caacgcagtagggctgaagcaatagggccctgtctcaatgataaagcaagtcaacttgat
aagcaagacccttgtgcttttacagaggctggagtggagccagaacctcaccacagttca
tccagcagcagtacaatcatcaaacaagatgatgatggtttcaagagctcaacaacagtg
gaacaaaacaagtccaacagacccaaactggaggtcttgaaaacagagagacggagttac
tccatcgaatccagcctccctctggatcacaactccttctcggtcagacagcggataaag
tctttcgagaacctggccagttttgacaagccggtaatccgagccatcgaaatacagtca
ttcactgtcacttctaaacctccagtgggcaggagatcatcaggcagtgtgacagcttca
gcagcaggtgcccactctatggacggttcccggtccttgagaaggagtctgagctcatgt
gctgataactccagtgaggctccagtgacgtcccctcgtctcaagaagtctccatccacc
atggctctgataggtcttgaatccaaccctgttgagaatataagagagtcccatactgaa
gagaaagctttgggtgttgcctcagtgagcgagcaagaccctgtatcccaaattccgcct
gtatcccatagtaggaaccccaggggttattcatccctgtctcgttccagacttagggaa
ctgagggcactaagcatgcctgacctggacaagctgtgcactgaggactttgcaagtgaa
gctaacactgtcactttcaaaactgagctggaaatccaacctaggaggtccttgggggcc
ccggcagtgaggcttaccaatctgaacaggagcgtgacccctggctcagtgtctgaagag
gagagggacaatgacaagaagttttcagacaacagctggtcaatcagtctaagtgaatta
tcagtctccacccttgaccagaacaagctgcagggcgttttgacctccctgatgtgtaaa
acagatgtggggaccttaatgcagcaagccaaggctcttgcagagggcaaagaagaggtt
tactttgtagtcttgaccaaagaagaaggctcaggtctgggcttcagcattgcaggagga
gtcgacttggagcagaaatgtgtaacagtgcaccgtgttttcgctagaggtatagcaact
ctggaaggtaccattcagcggggggacaacattatttcagtcagtggaacccccctgggg
ggagcctcccatggagatgccctttctgtactgcatcaggcccgtctccgtaaacaagcc
ctggtggttatcagaagaggaaaggagtctgagccattgtctcccagacaggaagtgtct
gcttccggaggaaggcggtcccaatctgcaagagacgttaccatggaagcagggacaggt
ccagctgtagacttgggtgatgccatcattgttgagctacaaaagacctctgctggcctg
ggcttcagtctcgatggaggaaaggcttcagtccacggggacaggcctctgtatgttaaa
cgcatattcaaaggtggtgctgccgagctgtccagggtgattgaggttgcagatgaagtg
ctggccattaatggaaggactctggagggactgaagcactacgatgcctggaacattatc
aaggcggtctcggaggggccagtccagttaattataagaaaacatcaagcttctgtatga
DBGET
integrated database retrieval system
