Polyodon spathula (Mississippi paddlefish): 121299800
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Entry
121299800 CDS
T07273
Name
(RefSeq) bile acid receptor-like isoform X1
KO
K08538
farnesoid X receptor beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121299800
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121299800
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121299800
Nuclear receptors [BR:
pspa03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
121299800
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121299800
NCBI-ProteinID:
XP_041083813
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Position
25:1980527..1999882
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AA seq
520 aa
AA seq
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MREWEESELSMAANSYIAVPEGYCASEPLQYYDVLSDHLSYPLQEADHQLSQFSQYTGMQ
FSPMLQGAPSSPSCYSPYPYCLQYPEGQYQLGVCELGKPSYTLPTELDPSGVPVLPGMAG
IPTLKRPRLGLRGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKKAVYQCKSGGHC
EMDMYMRRKCQECRLNKCRAVGMLAECLLTEVQCKSKRLRKNAKQGLDFLCSIKLEEEGP
ESKQVSSTTRQPAQLQKTLMMERVELTSQEQQLLDYIVEAHRRYRAPQEAPRKSQRGETA
DPGLGALRLSGAAALHAQELLEFTKSLPGFQQLHHDDQSALLRGSVVEAMFLHSAQLHNE
SAGEGAGADAVGLPWFVGYGTSLDGKPVYSPNPEQDTSTHPPTATGDDALRPVYHFYRSL
RDLNLTEQEYALLAAMVLLSSDRPFLKSREQVERLQEPLLELLYKFSKLRHPGDPQHFAR
LLGRLTELRTLGHHHSGVLSALRGKDQALPPPLCETWERQ
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtgggaggagtcagaactcagcatggctgccaacagctacattgcagtgcct
gaggggtactgtgcgtcggagccattgcagtattatgatgtcctatcagaccacctgagc
taccctctacaggaggcagatcaccagctctcccaattcagccagtataccgggatgcag
ttctcgcccatgctgcagggggcgccctcctctccgtcctgctactccccctacccgtac
tgcttgcagtaccccgaggggcagtaccagctgggggtgtgtgagctgggcaaaccctcc
tacacgctgcccactgagctggaccccagcggggtgcccgtcctccctggcatggctggc
atccccactctgaagcgtcctcgcctgggactccgagggcaggaggagctgtgtgtggtg
tgcggggacaaggcctcggggtaccactacaacgcactcacctgcgagggctgtaaaggg
ttcttccgacggagcatcacaaagaaggcggtgtaccagtgcaagagcggcgggcactgc
gagatggacatgtacatgcgccggaagtgccaggagtgccgtctgaacaagtgcagagca
gtgggcatgctggcagagtgtctactgacggaggtccagtgcaaatccaaacgactccgc
aagaacgccaagcagggcctggacttcctgtgcagcatcaagctggaggaagaggggcca
gagagcaagcaggtctcctccacaacccgacagcctgcccagcttcagaaaacattgatg
atggagcgtgtggagctgacctctcaggagcagcagctgttggattatattgtggaggct
catcgcaggtaccgagcgccacaggaggccccccgaaaaagtcagcgaggcgagacggct
gaccctggtctgggagccctgaggctgtccggtgcagcagcactgcatgcgcaggaactg
ctggagttcactaagagcctgcctgggttccagcagctgcaccacgatgatcagtctgct
ctgctcagaggctctgttgtggaagccatgttcctgcactcggcccagctgcacaacgag
agcgctggagagggggcgggtgcagatgctgtcgggctgccctggtttgttggatatggg
acgagtcttgatgggaagccagtatactcaccaaaccctgagcaagacacctcaacacat
cctcccactgctactggagacgatgcgctccggccagtgtatcacttctacaggagcctg
agggacctgaacctgacggagcaggagtacgcgctccttgctgccatggtgctgctctcc
tctgaccgcccgttcctgaagagccgggagcaggtggagagactgcaggagccgctgctg
gagctcctgtacaagttctccaagctccggcaccccggggatccccagcacttcgctcgt
ctgctgggccggctgacggagctccgcacgcttggccaccaccacagcggcgtgctgagc
gcactgcgcgggaaagaccaggcactgccaccaccactctgcgagacctgggagcggcag
tga
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