Polyodon spathula (Mississippi paddlefish): 121299807
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Entry
121299807 CDS
T07273
Name
(RefSeq) integrin alpha-2-like
KO
K06481
integrin alpha 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03271
Virion - Rotavirus
pspa04145
Phagosome
pspa04510
Focal adhesion
pspa04512
ECM-receptor interaction
pspa04810
Regulation of actin cytoskeleton
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
121299807
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121299807
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121299807
09144 Cellular community - eukaryotes
04510 Focal adhesion
121299807
09142 Cell motility
04820 Cytoskeleton in muscle cells
121299807
04810 Regulation of actin cytoskeleton
121299807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121299807
04515 Cell adhesion molecules [BR:
pspa04515
]
121299807
04090 CD molecules [BR:
pspa04090
]
121299807
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121299807
Exosomal proteins of bladder cancer cells
121299807
Cell adhesion molecules [BR:
pspa04515
]
Integrins
Integrin alpha subunits
121299807
CD molecules [BR:
pspa04090
]
Proteins
121299807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
ITGAX-like_Ig_3
DUF11
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
121299807
NCBI-ProteinID:
XP_041083834
LinkDB
All DBs
Position
2:70767536..70818814
Genome browser
AA seq
1198 aa
AA seq
DB search
MTCYLQKAFSKTRVMDFNSVVQLQVILACILRISEAFNVGISGAKVFTGPASEQFGYTVQ
QFTSANNKWLLVGSPWSGYTQNRMGDVYKCPLHQSRTTCDRLHLQNNTTISTVTEIKINM
SLGLTLARNSNKNLFMTCGPLWTQQCGSQYFPIGICSDVSPSFTSVQSFAPAIQMCGGPM
DIAIVLDGSNSIWPWPPIQSFLKKLLQGLNIGPNDAQVSIIQYAVDPDFEFRLNDYTSKE
KLITAASNIDQKLGDQTNTFRAIDFARSHAFLPSNGGRPGAAKVMVVVTDGESHDYSMRD
NVIGACEKAQISRFGIAVLGYYIRNDIDTKNLINEIKSIASSPTERYFFNVSAEAALSEI
AGTLGERIFNIEGTGTGGEIQMEMSQVGFSAYYSNKTDVMMLGAVGAYGWSGTVVHKTAS
KSDIFPQQTFQKTLEDRNHSSLLGYSVTTLTSDDSELYVAGAPRSNHTGQVITYSVNKQG
KPTVVQSQRGEQIGSYFGSVLCSVDVNQDSRSDVLLVGAPMFMNDLKREVGRVYMFSVNK
GILGQREVLQGPSHSENARFGMAIVAVPDLNVDGFSDVIVGAPLEDENRGAIYIYNGDER
TIRTVYSQKISGSEISKKLQYFGRSLDGNGDLNADSIPDVSVGAYGNVVQLWSRSIADIT
VKATFTPDKISVLNKNCDFNGRRLFCFNASICFKAHFRPKTATGPVDIQYNATLDADLQS
SRVSSRGLFTESNDRLLQKNIGVGSSEVCFKHKVYVQEAPDFVNSIGLRVDVGLVKPQSS
PVLDMYRHNSWEFSIPFSKDCGEDELCLSDIVLNVQKKNLDSSSSPLLISTKNRRVSFAV
KLENTMENAYNVKITAIYSKNLFFSSYTQPADGTEVKCQVEATESISCQVGYPALKPDQE
VSFDINFDFNFNHLQKEAYVNFKALSDSTEETPANNIVNILFPVQYDSEIILTRDTSLNF
YEINRDLLVKTTVNSYEDIGPEFNFTLKVTTGSFPVHMAYLTIALPVSTKANNPLLYLTG
VNTEMAKDVSCETSSLLNPLEIGKRPYLASFSKERLTGIKELDCNTATCQHIKCWFKDLE
PRSNYLLNITTRIWNGSFTTSTFQSIKLTASAEMDTSEPELLIILDKKLPIEITISKPGE
KGEVPVGVIVGSIIGGLILLAALVALLWKLGFFKRKYEQLMKSSDDDGEADALQDETL
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgacctgttatctacaaaaagctttttccaagactagagtcatggattttaacagtgtg
gtgcaactgcaggtcatcttagcttgcattcttcggatttctgaagcttttaatgttgga
atatcaggagccaaggtattcacaggacctgcctctgagcagtttggatacacagtgcaa
cagtttacaagtgctaataacaaatggttgctggttggctctccctggagtggctacaca
cagaacaggatgggagacgtatacaagtgcccattgcaccaatccagaaccacatgcgac
aggctgcatttacagaacaacacaaccatctccactgtgacagagataaaaatcaacatg
agtctcggcttgactcttgctcggaattctaacaaaaatctatttatgacgtgtgggcca
ctgtggacacagcagtgtggcagccagtacttccctattggaatctgctcagacgtcagc
ccctccttcacttcagtacagagctttgctcctgcaatacaaatgtgtgggggtcccatg
gatattgcaattgtgttagatggctccaacagtatttggccatggccaccgatccagtct
tttctcaaaaaattattgcaaggattaaacattggtccaaatgatgcccaggttagcatc
atacagtatgcagttgacccagattttgaattcagattgaatgactacacaagcaaagaa
aagctcattactgctgcatccaacatagaccagaagttgggggaccaaacaaataccttc
agagccattgactttgccagatcacatgccttcttgccatcaaacggtggtcgtcctggt
gctgctaaagtgatggttgttgtgactgatggagaatcccatgattactcaatgagagac
aatgtcattggtgcttgtgagaaggctcagatctctaggtttggtattgctgtccttggc
tattatatcagaaacgacattgatactaagaacctcattaatgaaatcaagtcgattgcc
agctctccgacagagcggtactttttcaatgtatctgctgaagcagccctgtcggagatt
gctgggactctgggggagcgcatctttaacattgaaggaactggtactggtggtgaaatc
caaatggaaatgtcccaggttgggtttagtgcctactactcaaacaaaacggatgtaatg
atgctgggggcagtaggagcctatggctggagtggcacggtcgttcataagactgccagc
aaatctgacatattccctcaacaaaccttccagaagaccctggaggataggaatcacagc
tccttactgggttactcagtgaccacgctgacgagcgatgactctgagctgtatgttgct
ggagccccccgttccaaccatactggccaagtgatcacttactctgtaaacaagcaaggc
aagcctacagttgtgcagtcacaaagaggagagcagattggttcctattttggcagtgtc
ctctgctcagtggatgttaaccaggactcccgatcggatgttttattggttggtgctcca
atgtttatgaacgacttgaagagggaagtgggacgggtctatatgttttcagtcaataag
ggcattttaggacagcgggaggttctgcaaggcccatcacactctgagaacgctcgcttt
ggaatggctattgttgctgttcctgacctcaatgtagacgggttcagtgatgtcatagta
ggagctcctttggaggatgagaacagaggtgccatttacatttacaatggagatgaaaga
accattaggacagtgtattcccagaaaatatctggctcagaaatcagcaagaagctgcag
tattttggaaggtctcttgatggcaacggagatttaaatgcagactccattcccgatgtg
tcggtcggggcctatgggaatgtagtgcaactctggtcccgtagtatagcagatataaca
gtaaaggccacttttacgccagacaaaatcagtgtcctcaataagaactgtgacttcaac
gggagaaggctgttctgttttaatgcaagcatctgcttcaaggctcactttaggccaaaa
acagccaccggacctgtcgatatccaatacaatgcgacacttgatgcagatctccagtcc
tctagagtgtcttccaggggtttgtttacagaaagcaatgaccggctcctgcaaaaaaac
attggagttggcagctcagaagtgtgctttaagcataaggtttatgttcaggaagcgcct
gactttgtgaattccattggcctgcgtgttgacgttggcctggtgaagcctcagagcagc
cctgtgctggacatgtacagacacaactcctgggagttctctattcccttctctaaagac
tgcggtgaagatgagctctgcttgtccgatattgtgctgaatgtccagaagaagaatctg
gatagcagctcttcaccactcctcatcagcactaagaacagaagggtgtcattcgcagtg
aagctggagaacaccatggaaaatgcatacaatgtgaaaatcactgccatttactcaaag
aatttattcttctcatcttacacccaacctgctgatggcactgaggtgaaatgccaagta
gaggcaaccgaatccatctcttgccaggttggatatccggctctcaaaccagaccaagag
gtctcctttgacatcaactttgattttaacttcaaccacttgcagaaagaggcttatgta
aacttcaaggctctcagcgatagcacagaagagacgcctgcaaacaacattgtcaacatc
ttatttcctgttcagtatgactctgaaattattttaacaagagatacaagcttgaatttc
tatgagataaaccgggacctccttgttaaaaccacagtgaacagctatgaagacattggt
ccagaattcaacttcacactgaaggttaccactgggagcttccccgttcacatggcctac
ctcacaattgctctgccagtgtcaaccaaagcaaataacccactgctgtacctcaccggg
gtcaatacagagatggccaaagatgtcagctgtgagacaagcagcctgctgaacccactg
gagatcggaaagaggccgtatttggcatccttctccaaggagaggctcactgggatcaag
gaactggactgtaacactgcaacttgtcagcatatcaaatgctggttcaaagacttggaa
ccaagaagtaactatctgttgaatatcacaacaagaatctggaatggaagcttcaccact
tcgacatttcagtctataaagctcacagcaagcgcagagatggatacgtcagagcctgaa
ctactgattatcttggacaaaaagctaccaatcgaaattacaattagcaaacctggtgag
aaaggagaggtgccagtgggggtgatcgtaggcagtataatcggagggcttatcttactg
gctgcgctggttgctctcttgtggaagcttggcttcttcaaaaggaagtacgagcagctg
atgaagagcagcgatgacgatggagaggctgatgccctgcaggacgagactttatga
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integrated database retrieval system
