Polyodon spathula (Mississippi paddlefish): 121299808
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Entry
121299808 CDS
T07273
Name
(RefSeq) DENN domain-containing protein 2C-like isoform X1
KO
K20161
DENN domain-containing protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121299808
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121299808
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
SPA
Motif
Other DBs
NCBI-GeneID:
121299808
NCBI-ProteinID:
XP_041083831
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All DBs
Position
25:complement(4066934..4079513)
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AA seq
914 aa
AA seq
DB search
MHAPGGGAVPWHSPTSGRALTRNPAINIKQKISQWEGRSQQQGLNVRGGHAVLSRTQSDG
SENANGKPGLAKAKSLGLDFREACQAPDGVTKQQQPVNGGGGDNLKDIHKMVSSDCCPQS
GKKPGNGSLAADACRSLPPGSFYTSRGFWKKMDLPWQKEVLQAELKRKREGPSPTEKEAL
PVNPLPKPQRTFQYLGERTPPGQLGGCIHGKGQSAARNGPSSSPPSYPPPSPEGIVNGIT
RGKPNRKSFEFEDAERLNFLVSGSRESAPEECRPGLYHALSEDNIYEDIICESRDPVKEN
AYEDVNLPALHKLRGAATPKRNAPGQRSTPPKLPPKPARLFRQVPLLKSWRAQDLSKTGR
CCTAAPPAVRATPLSPTSECKRSGPRPESNGRTRVLPRFVSKIQEIFNAKRGKKRVKTQV
TMGRGDASDTESETEEPSVGGGRRSVHVHSTLRRNPLYQTLEKDLYELQEQQLFQLFVVV
SLRKKPSSNAYTPEITQQFPNKFEKSTRQSRDAEQRLRAIPSFCFPDSQDWRPSAELPSE
TFSFVLTGEDGGRWFGYCRKLLPSGKGKRIPEVHCIVSRLGCFNLFAKILEEVERRRDIS
PALVYPFMRSVMEAPFPAPGRTITVKNFLPGSGNEVLELCRPVDSRLEHVDFDCLLQCLG
GSQLLQVFASLLLERRVIFVADKLSTLSRCAHAAIALLYPFTWQHTYIPVLPACMIDITC
SPTPFLIGVLSCALPELMELPIEEVLIVDLCANRFIRQISDEDCILPSKLQAALLQVLEE
RGDILALEAAGMRGGPPPCLSSLLSEAFVHFFVELVGHYSLHMAVGEGGRRALRRDAFRK
SHPSRGARQFLQLFMETQTFSGFIQDRELRKSGVKGLFELRAAEYLETMPDSEPGGMNKF
LKGLGNKMKFLQKK
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccccaggaggaggggctgttccctggcactccccaacctccggcagggccctc
acccgcaaccccgccatcaacatcaagcagaagatctcccaatgggagggccgcagccag
cagcagggtttgaacgtcaggggcggccacgctgtgctttccaggacccaatccgatggc
tcagagaacgctaacggcaagcctggcctcgccaaggccaaaagcctcggcctcgatttc
agggaagcctgtcaggcccctgatggcgtgaccaaacaacagcaacccgtcaacggcggc
ggtggtgacaatttgaaagacatccacaaaatggtgagctcagactgctgccctcagagt
gggaagaagccgggaaatggcagcctggcggcggacgcttgccggtctctcccacccggg
agcttctacacctccaggggtttctggaagaagatggacttgccctggcagaaggaggtg
ctgcaggcggaactgaagaggaaacgagagggccccagccccaccgagaaggaggctctc
ccagtcaacccactgcccaagcctcaacgcacattccagtacctgggagagcgcaccccg
ccgggccagttggggggctgcatccacgggaagggccaatccgcagccaggaatgggcca
agctcctcccctccctcttacccaccccccagcccggaggggattgtaaacggaatcaca
cgaggaaaacccaacaggaaatcctttgagtttgaagatgcggagaggctcaatttcctg
gtgtctggcagcagagagtcggcgcccgaggagtgccgcccggggctctaccacgctctg
tctgaggacaacatttatgaggatatcatctgtgaatcacgagacccggtcaaagagaac
gcgtacgaggatgtgaatctgcctgcactgcacaagctgagaggggccgccactcccaag
agaaacgccccaggacagcgctccactccgcccaagctgcccccgaagccagccaggctc
ttcagacaggtccccctcttgaaaagctggagagcccaagacctgagcaagaccggccgc
tgttgcacagcggcgccccctgcagtccgagccacgccgctgtcgccgacttcagagtgc
aagaggagcggcccgcgcccagagagcaacgggaggaccagggtgctgccacggtttgtg
agcaagattcaggagatctttaacgccaagaggggaaagaagcgagtgaagacccaggtg
accatgggcagaggtgatgccagtgacacagagagtgagacagaggagcccagcgtaggc
ggtggccggcgctctgtgcatgtccactccactctgcggagaaaccctctttatcagacg
ctggagaaggacctgtacgagcttcaggagcagcagctcttccagctcttcgtcgtcgtg
tcgctacgcaagaaaccctccagcaacgcctacacccctgagatcacacagcagttcccc
aacaagtttgagaagagcacgcgacagtcccgggatgcagagcagaggctcagagccatt
cccagtttctgcttcccagactcccaggattggagaccttcagctgagctccccagtgaa
accttttccttcgtgctgactggagaggacggaggccgctggtttgggtactgccgcaag
ctcttgcccagtgggaaggggaagcggatcccggaggtacactgtattgtcagtcggctg
ggctgctttaacctctttgccaagattctggaggaggtggagcggcgcagggatatctct
ccggctctcgtctacccgttcatgcgcagtgttatggaggctccattccccgcccccggg
cgcaccatcaccgtcaagaacttcctgcctggctccggtaacgaggttctggagctgtgc
cggcctgtggactcccgcctggagcacgttgacttcgactgtctcctccagtgtctggga
gggagccagctgctgcaggtgttcgcctcgctgctcctggagaggagagtcatcttcgta
gctgacaagctcagcaccctgtcgcgctgtgcccacgctgccatcgctctgctctacccc
ttcacctggcagcacacctacatccctgtgctgccggcctgcatgatcgacatcacctgc
tcccccacccccttcctgatcggagtgctgtcctgtgccctgcccgagctgatggagctg
cccatcgaagaggtgctgattgtggatctgtgtgcaaaccgcttcataagacagatctcg
gatgaggactgtatcctccccagcaagctccaggcagctctcttgcaggtcctggaggaa
cgaggagacatcctggcgctggaggcagcaggaatgagaggaggtcctcccccctgcctc
agctctcttctctctgaggcatttgtccatttctttgtggagctggtgggtcattactcc
ctgcacatggcggtaggggagggggggcggagggctctccggcgggacgctttccgaaag
tcccacccctcccgcggtgcgcggcagttcctgcagctcttcatggagacgcagacgttc
tccggcttcatccaggacagggagctgcgcaagagcggggtcaaaggcctcttcgagctt
cgagcagctgagtatttggagacgatgccggactcggagcccggtggcatgaacaagttt
ctgaagggactgggaaataaaatgaaatttcttcaaaagaagtaa
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