KEGG   Polyodon spathula (Mississippi paddlefish): 121299838
Entry
121299838         CDS       T07273                                 
Name
(RefSeq) methylosome protein 50-like
  KO
K13221  methylosome protein 50
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pspa03041]
    121299838
Spliceosome [BR:pspa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    121299838
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_SCAP ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_RIG_1st NBCH_WD40 Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 121299838
NCBI-ProteinID: XP_041083905
LinkDB
Position
25:complement(2939540..2945579)
AA seq 322 aa
MIKENRWSIPPNAPACMEKHLDSAQYRADGALLLGASSLAGRCWQGSIWVFKDPKTAPNE
GFCSAGVQTEAGVADAKWVSERGILVASDSGAVELWELAEDETLIVSRFCKYEHDDVVTT
VSPQAGGEHAVSGSLDCRVKVWDLTQETVLNTYNAHSGPVMCVSSNPSDESLFLSSGQDG
RLLLWDKRKPKPASRIDTGPSQCIPTSIAWHPQQSGLFAYGDETGKVSLRDLQKPDSLQT
LKPHTRSVTGLAFSAHSTPLLSSISNDCSVVVLDPQLSEVFRDRTHQDFVRGVCWSPVTS
STLTTVSWDHQVIHHTVCQAGV
NT seq 969 nt   +upstreamnt  +downstreamnt
atgattaaggaaaatcgatggagcatccctcccaacgccccggcttgcatggagaagcac
ttggattcggcccagtacagagcagacggggcgctgttgctcggggcgtccagcctggcc
ggccgctgctggcagggttccatctgggtgttcaaggaccccaagacggcccccaacgag
gggttctgcagtgcgggggtgcagacggaggcgggggtggctgatgcaaagtgggtgtcg
gagcgaggcatcctggtcgcgtccgattcaggtgcggtggagctgtgggagctggcagag
gacgagacgctgatcgtcagccggttctgtaaatacgagcacgatgacgtcgtgaccaca
gtgagcccgcaggccgggggggagcacgctgtcagcggcagcctggactgccgtgtgaaa
gtttgggatctgacacaagagacggtactaaacacatacaatgctcattccggtccagtg
atgtgtgtgtcctcgaaccccagtgacgagtccctgttcctgtccagcgggcaggatggc
aggctactgctctgggacaagaggaagcccaaaccagcctcccgaatcgatactggcccc
tcccagtgcatccctacctcaatcgcatggcacccgcagcagagcggtctctttgcgtac
ggggatgaaaccgggaaagtttctctgagagacttgcagaagcccgacagcttgcagacg
ctgaagccacacactcgcagtgtgaccggactggccttctcagcacacagcactcccctg
ctctcttctatcagcaatgactgctctgttgtagttttggatcctcagctgtcagaagtg
ttcagggacaggacacatcaagattttgtgcgtggcgtgtgctggtcccccgtcaccagc
tccaccctcaccacagtgagctgggatcaccaggtcattcaccacacagtgtgccaggcg
ggcgtgtag

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