Polyodon spathula (Mississippi paddlefish): 121299848
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Entry
121299848 CDS
T07273
Name
(RefSeq) nuclear receptor corepressor 2-like isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121299848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121299848
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
121299848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
DnaT
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
121299848
NCBI-ProteinID:
XP_041083925
LinkDB
All DBs
Position
25:19045103..19165579
Genome browser
AA seq
2493 aa
AA seq
DB search
MSRPTQPGPQNRRPVDSRHHPNPLPIPMQLARAHTDVGIADYHHHSRDYNSHMSHGAMSQ
PYRRRPSLLSEFQPGNERGQDQHLRYEQIGYITESNSQSEAEYAEVKRPRLELAAESLMR
HPAHLSSSQFGGAEDVSKEQGGGIGKLEPVSPVSPAQLERELDLVPARFSKEELIQNMDR
VDREITMVEQQISKLRKKQQQFEEEVAKPQEPEQPISPPPSEAKHRSLVQIIYDENRKKA
EEAHRILEGLGPRVELPLYNQPSDTKQYHENIKINQAMRKKLILYFKRRNHARKQWEQKF
CQRYDQLMEAWEKKVDRIENNPRRRAKDSKVREYYEKQFPEIRKQRELQERMQSRVGQRS
GGLSTSAARSEHEVSEIIDGISEQENSEKQMRHLAVIPPMLFDAEQQRIKFINMNGLMDD
PMKVYKDRQVMNVWSEQEKETFREKFIQHPKNFSLIASFLERKTVADCVLFYYITKKNEN
YKNIVRRNYRRRGRSQQPPQQQPPQQPPQQVGRSSQEEKDEKEKEGEKEEEKAELDNDKD
DPLKDRSGDTSGEEGEDKEPTVAFKGRRTANSQGRRKGRITRSMANENEEATTPPLNNEL
ANLEMNESSRWTEEEMDTAKKGLLQHGRNWSAIAKMVGSKTVSQCKNFYFNYKKRQKLDE
ILQQHKMKVEKERNARRKKKNAAAVQSEEAPSVTEEEEMEVSGASGNEEEMAEDAEGATN
NSSDTESLPSPRSSEDSKTKDNNSEGNRPKSTPGASVENSAGPSAGSDDTAAGEPHRIPD
KTSAQSSKPKEQKEVKVEVEETLKEDLIKSEASEDSKEQQLDSTDKKPAVDIEAGKRTAK
AMKVENQHGHKAGANTDSDSSATCSADEVEEPDTSDKNRMTSPRPSLLNYSHDSVINSPL
QKPMDLKQLKQRAAAIPPIMPEVSLQGAPRSGKPQAPHHALALYQQQITMVHESVQENKA
AIKQQQQQAEREKQQSSSPHIKTRSPAAPSDREEINDNERWLQTLLHGFHKQSSYSPEGR
KQSGEQDLRPTNLSRPTLLPYQHSPREMSKVSSHPEPHLLHYNQGYQTAAHHMPINLHQD
SGGLAAVRPLQIPNPPPLISSTKPPGMLERPGGSITQGTPVQLHSSGYVSEHGKDSAGSL
TLGMPWMDHKKIVPFPAVKQEQLSPRSQAIQSESMLTQGAAHESSIIRGSSISAVQGGSI
TKGIPGTRIPQEAPMTYRGSITQGTPAEVLYKGTIARIITEDSPNRAERAREEASSKGHV
IYEGKIGHILSYDGAGQNSKEEGRGLSAPPETTGMKRSHDMMEGGISRGLPVRDSLSVNC
EGLIGRAMPQDRHSPHHYKDAHHIRGSISQGIPRHMEPMEDYLRRDGKQLKRENTPPRGP
PPEVLKGRHEVATVKEPGRSIHEIPREEMRHIPEVSLATKPAKEGSITQGTPMKHDSGSN
KRHDVRSIIGNPSRYHPMQHHLEMLQDARVRYEESLKGRPSAVVSTSGSISRGSPVIITE
PGKAHHSPLAYEDHKAAHRASFTGHPHRCSPVSSRESAARQHESGGMSSGKAQSQERKPT
PTPREVSANKSPHAGVPDHHPSLASYEQLLRGVGAAELYRGQIPLTFDPASLPRGIPMEP
AYYLPRHLAPNHAYGHPYPPYLIRGFPETAALENRQTILNDYITSQQMHHAAAAAMAQRA
DLLRGLSPREQALALTYSAGPRGIIDLSQVPHLPVLVQSNAAASVPPMDRITYIPGAPSA
YGSRPYNTSPISPGGPSHIAKMPGTPSSERERERERERDRERDRERERDRDRERERDRDR
ERDREREREREKPTPSAANEKHAPIWRPGTEQSSGSSSSSISHQPPAHSYSLQNSPVSPR
TQDNIQQRPSVLHKTLPLLTSESTTPSVLRSLSSAGSPAGRYTGYNPQLQRPITSAETYQ
PGMDPANVPKGDLGRGQEGGKAERHHNKASSNTMKPKHAQEHTASPAKTEPRTLIATLGA
GYNSQYQPQQGRNHQILPHQHPHTLPSSDQAANEHPSRENTQNKAVSVQEQELRALGKTT
MTAANFINAIIMRQIPCDKGKRERGSLAASAACDVQQKMSSESHLQHFRSVPEGYQSPGH
PTQQQQQQQQPSFKGHQRVVTLAQHINEVITQDYTRQYPQQLNSQPQQQGYPYQSSPVLD
LRRTPNEQLHQQQQESGQSARYTPDGAGMDRGRDRSPLQNKVSPMSGSGDGIEPISPAGG
LSEPEQSQGPGCHGDQGDQVMGSRSPANNSQPPAFFSKLTESNSAIVKSKKQEMIKKMST
VSGNEPHFNTGQPGTEIFNMPASTTAGPVSNRSHTTPEPSGNSIGLEAIIRKALMGKYDD
QGEERAVAINTLAASASVPAAIPIAAADGRNEDIHSLAAGGKPKGSGRSNSRKSKSPGPG
LSGSERPSSVSSVHSEGDCNRRTPLTNRVWEDRPSSTGSTPFPCNPLTMQLPTGLVPASS
TIQQGGASGVNRVWDEEPKPLLCSQYETLSDSE
NT seq
7482 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacctacacagcctgggccccaaaacaggaggccggtggacagccgtcaccac
cctaaccccctgcccatccccatgcagctagccagggctcacacggatgtaggaattgcg
gattaccatcatcattctagagactacaattctcacatgtctcatggggcaatgtcccag
ccttatagaagaagaccgtctttgttgtcagaatttcagccaggaaatgaaagaggtcaa
gaccagcacctgaggtatgaacagattggatacattactgagtcaaacagccaatcagaa
gctgagtacgctgaggtcaagaggccaaggttggagctggcggcagagtccttgatgaga
cacccagcccacctgtcctcttcccagttcgggggggcggaggatgtgtcaaaggagcag
ggcggtgggattggtaaactcgagcccgtctccccggtaagccctgcccagctggaacgg
gagctggacctggtaccggcccgcttctccaaggaggaactgatccagaacatggacaga
gtggaccgtgagatcaccatggtggagcagcagatctccaaactcaggaagaagcagcaa
cagtttgaagaggaagtggccaaaccccaagaacctgagcagccgatttctcccccacct
agtgaagccaagcatcgcagtctggtgcagatcatttacgacgaaaacaggaaaaaagca
gaggaggcccacaggatcttagagggactcggtccacgcgtggaactgcctctatacaac
cagccttcagacaccaagcaataccatgaaaatataaaaataaaccaggcaatgcggaag
aagctaattttatacttcaagaggagaaaccatgctcgtaaacagtgggaacagaagttc
tgccagcgctatgaccagctgatggaagcctgggaaaagaaagtggatcgcatcgagaac
aacccgcggcggcgcgccaaggacagcaaagtgcgcgagtactacgagaaacagttcccc
gagatccgcaagcagagggagctgcaggagcgcatgcagagcagggtcggacaaaggagt
ggaggcctctcgacatcggcggcgcggagcgaacacgaggtgtccgagatcattgacggc
atttcagagcaggagaactcggagaagcagatgcgtcatctggccgtcatcccgcccatg
ctgttcgacgcagagcagcagcgaatcaaattcatcaacatgaacggcctcatggacgac
cccatgaaggtgtacaaggacagacaggtcatgaacgtgtggagcgagcaggagaaggag
accttccgagagaagttcatccagcacccgaagaacttcagcttgatcgcttcgttcctg
gagagaaagactgtggctgactgcgtcctgttttactatattaccaagaaaaatgaaaat
tacaaaaacattgtgagaagaaactatcgccggcgcggaaggagccagcagccaccgcag
cagcagccaccgcagcagccaccacagcaagtgggccgcagcagccaggaagagaaggat
gagaaagagaaagagggagagaaggaggaggagaaagcagagctagacaacgacaaagat
gaccctctgaaggacagaagtggggacacctcaggagaggaaggggaggacaaggagccc
actgtcgccttcaagggccgccggaccgccaacagccaagggcgtcgcaaggggcgcatc
actcgctcgatggccaatgagaacgaggaggccaccacgccaccgctcaacaacgaactt
gctaatctggagatgaatgaaagctctcgctggacagaggaggaaatggatactgccaaa
aaaggccttcttcagcatggcagaaattggtctgctattgccaaaatggtgggctccaaa
actgtgtctcaatgcaagaacttctactttaactacaagaagaggcagaaactggatgaa
attctgcagcaacacaaaatgaaagtggagaaggagcgcaacgcccgacggaagaagaag
aacgcagcggcggtgcagagcgaggaggccccgtccgtgacagaggaggaggagatggag
gtgtcaggggccagcggcaacgaggaggagatggccgaggacgcagagggcgcaaccaat
aatagctcagacacagaaagcctcccatctcccagatcttcagaggacagcaaaaccaaa
gacaacaacagtgaaggtaacaggcccaagtcaactccaggagcttcagtagagaacagc
gctggacccagtgctggatcagacgacactgctgctggagagccccatagaattccagac
aagacctctgctcagagcagcaagcctaaggagcagaaagaggtgaaagttgaagtcgag
gagactctcaaagaagacctcattaagagtgaggcctctgaggactcaaaggagcagcaa
ttggactctactgacaagaaaccagcagtggatattgaggcaggcaaaaggacagccaag
gctatgaaagtggaaaaccagcatggacacaaggctggtgcgaacactgacagtgactct
agcgccacctgcagtgcagatgaagtagaggagccggatacctcagacaagaacaggatg
acctcgcctcggccaagcctgctgaattactcccacgacagtgtcataaactcgccgctg
cagaagccgatggacctgaaacagctaaaacagcgggctgcagccatccctcctattatg
cccgaggtgtcccttcagggagcgccccgcagtggcaagcctcaggctcctcaccacgcc
ttggcactataccagcaacaaattacaatggtgcatgaatctgtgcaggagaataaggca
gcgataaagcagcagcagcaacaggctgaaagagagaagcagcagagtagcagccctcac
atcaaaaccaggagccctgcagcccccagcgacagagaagaaatcaatgataacgagagg
tggctgcagactctgctacatggattccataaacaatcttcctactctccagaagggagg
aagcagagcggggagcaggatttgaggcctaccaacctgtctaggcccacactgttgcca
taccagcattctccaagagagatgtccaaagtctcttctcaccctgagcctcacctactg
cattacaaccaaggttatcagacagcggctcaccacatgccaataaacttgcatcaggac
agcggtggactggcagcagtcagacctctccaaatccccaacccccctccgctcatctca
tctaccaaaccccccggcatgctggagaggccggggggctccatcacacagggcacaccc
gttcagcttcacagttcaggttatgtctctgaacatggaaaggactctgcaggttcgctc
accctggggatgccctggatggatcacaaaaaaattgtgccattccctgcagtgaaacag
gagcaactttcacctcgcagtcaggcgatccagtcagagagcatgcttacccaaggtgct
gcccatgagagcagcattatcagggggtcctccatctctgcagtgcaagggggcagcatt
accaagggaatcccgggcaccagaatccctcaggaggcaccaatgacctacagagggtcc
atcactcagggcactccggcagaggtcctttacaaaggtaccatcgcaaggataataact
gaagacagtcccaacagagcagagcgagcgagagaggaggcctccagtaaaggacacgtc
atctatgagggaaagatcggccacatactgtcctacgatggtgctggccagaactctaaa
gaggaaggcagggggctgagcgctccccccgagacaacgggaatgaagcgctctcatgac
atgatggaaggaggaatctccagagggttacctgtacgggactccctgtctgtcaactgt
gaagggctgattggtcgagccatgccacaggaccgacacagtcctcaccactacaaggat
gcccatcacatccggggatcaatctcacaaggtatacctcgccacatggagcccatggag
gattatctccgtagagacggcaaacaactgaagagagagaacactcctcctcgaggcccg
ccccctgaggttctcaaaggaagacacgaagttgccacggtgaaggagccaggcaggtcc
attcacgagatcccgcgagaggagatgcggcacattccagaggtttccttggcgacaaag
cctgccaaagagggatccattacccagggtaccccaatgaagcacgacagcggttccaat
aaaaggcacgatgtgcgttcgatcatcgggaacccctcacggtaccacccgatgcagcac
cacctggagatgctgcaggacgcgcgggtgcgctacgaggagagcctcaagggccggccc
agcgcggtggtcagcacctcgggctccatctcccgcggctccccggtcatcatcactgag
ccaggcaaggcccaccacagccccctggcctacgaggaccacaaggcggcacacagggcc
tcgttcactgggcacccccaccgctgctctcctgtgtcgtcaagggaatccgcagccagg
cagcatgagagcggtgggatgagttcagggaaggctcagtctcaggagaggaagcccacg
cccacgccaagggaggtgagcgccaacaagtccccccatgccggcgtcccagaccaccac
ccctcgctggcctcctacgagcagctgctgcggggcgtgggtgcggccgagctgtaccgc
gggcagatccccctgaccttcgaccctgcctccctgcccaggggcatcccaatggagcca
gcctactaccttccacggcacctcgccccaaaccacgcctatgggcacccctaccccccc
tacctgatccgtgggttccccgagacggccgcactggagaacagacagaccatcctcaac
gattacatcacctctcagcagatgcaccacgccgcagccgctgccatggcccagagggcc
gacctgctgcgtgggctgtcgcctcgggaacaggccctggctctcacctattctgcaggc
ccgcgggggatcattgacttgtctcaggttccacacttgcctgtcctggtgcagtctaat
gctgctgcatcagtgccccctatggatcggatcacatacatccctggagcgccctctgcc
tacgggagtaggccttacaacacctcccctatctcaccaggtgggccatctcacatcgcc
aaaatgcccgggacaccttcatcagagcgggagcgagaacgggagagggagagggacaga
gagagggacagggagagggagagggacagggacagggagagggagagagacagggacagg
gagagagacagggagagggagagggagagggagaagcctactccatctgctgccaatgag
aagcatgcccccatctggagacccggcacagagcagagcagcggcagcagcagcagcagc
atcagccaccaaccccccgcacattcctacagcctccagaactccccggtctccccacgc
acccaggacaacatccagcagagacccagcgtgctgcacaagaccctccccctgctcacc
agcgagtccaccacaccctccgtgctcaggtccttgtcctcagctggctccccagcaggc
cgatacactgggtataacccccagcttcagagacccatcacctcagcagaaacttaccag
ccgggcatggaccctgccaacgtgcccaagggggacttagggagggggcaggagggaggc
aaggcagagcgccaccacaacaaggcgagcagcaacaccatgaagccaaagcacgcccaa
gagcacacagcctcacccgccaaaaccgagcccaggacgttgattgccacgctgggcgcg
ggctacaacagccagtaccaaccacaacagggtcgaaaccatcaaatactaccccaccag
cacccgcacaccctgccctcctcggaccaggcagccaacgagcaccccagtagggaaaat
actcaaaacaaagctgtttcggttcaggaacaggagctccgagcactcggtaagaccacc
atgactgcggccaacttcataaacgcaattatcatgcgtcaaattccttgcgataagggg
aagcgagaaagaggctcgctcgctgccagcgccgcttgtgatgttcaacagaagatgtct
tcggaatctcatctgcagcatttccgcagcgtacctgaagggtaccagtcaccaggtcac
cccacacagcagcagcagcagcagcagcagccctccttcaaagggcatcaaagagtcgtc
accctggctcagcatatcaacgaggtgatcacgcaggactacacccgtcagtacccccag
cagctgaactcccagccccagcagcagggctacccctaccagagctccccagtgctggac
ctgagacgcacccccaatgagcagctccaccagcagcagcaggagtctggccagagcgcc
cgctacactccggatggggcaggcatggacaggggccgtgacaggtctccgctgcagaac
aaggtgtcaccaatgagtgggtcaggagatggcattgaacccatctccccagcagggggc
ctgtctgagcccgagcagtcccagggacctggctgtcacggggatcagggcgatcaagta
atgggttcgcgctctccggcgaacaactcgcagcccccagccttcttcagcaagctgacg
gagagcaactcggccatcgtcaagtccaagaagcaggagatgatcaagaagatgagcaca
gtcagtggaaacgagccgcacttcaacactggacagccaggaactgaaatattcaatatg
ccagcttcaacaacagcagggccagtcagtaatagaagccacaccactccagaaccttcc
ggtaacagcataggcttggaggcaattattaggaaggccctaatgggtaaatatgatgac
caaggggaggagcgtgccgttgctattaacactctggctgccagtgcaagtgtgcctgct
gctatccccattgctgctgctgatggacggaatgaggacattcactccttggcagctgga
gggaagccaaagggcagcggccggtcgaacagccggaaaagcaagtctccgggcccgggc
ctgtccggcagcgagaggccttcatctgtctcctctgtgcactccgagggtgattgcaac
cgccggacaccactgaccaaccgggtctgggaggacagaccctcctccacaggttcgact
cccttcccctgcaatccactgacaatgcaactccccaccggccttgtaccggcctcctcc
acgatccagcagggtggcgcgagcggcgtgaacagagtgtgggacgaggagccaaagcca
ctgctctgctcccagtacgagaccctttcggacagcgagtga
DBGET
integrated database retrieval system
