Polyodon spathula (Mississippi paddlefish): 121299923
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Entry
121299923 CDS
T07273
Name
(RefSeq) F-box/WD repeat-containing protein 8-like
KO
K10264
F-box and WD-40 domain protein 8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121299923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121299923
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121299923
Cul7 complex
Target recognizing subunit
121299923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
F-box
Beta-prop_SCAP
WDR55
Beta-prop_EML_2
EIF3I
PQQ_2
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
HSD3
Motif
Other DBs
NCBI-GeneID:
121299923
NCBI-ProteinID:
XP_041084096
LinkDB
All DBs
Position
25:complement(20983002..20994886)
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AA seq
770 aa
AA seq
DB search
MDLQEFRERWKKEVRERERNSQAGGDAENPENHNKNPKTSDETLDKPTGDLGNTDTLQNR
EGSRKSSGANIHSSALQGTSHQSSSSALLETGSGTSNAEQTSKIGGSGVSDNRKRSLCCK
CGVPGIASGPAPLNEDAGSGCSCRLKLNRDGSSFSGSESEVQRGSSLKAASETPLLSDES
QSGTSLRTCHNQQVGSKDQPEYISIAESLLEGRTSPLRDRIEVERSVGKKRHAENVATRR
PFHQLQQQPLCKVHKKETLVDQLIQDLNEINDIPFFDVELPYELALKIFQYLDRRELGRC
AQVSKVWKVLAEDEVLWYRLCLKEGHLAGASVSDSPCWKGTLRDYRQMKDTLRSNWKNRV
GEVRQLQYELGKVLCDASSSNGLVIAGYTSGDVRLWDTLNWDSSASYLQPSHIAVETVLR
PHVTHVRVNGAVAVAAYEDGIVDVWSTEAGREPVHHYQHLQRVQGLALGTEGAIVATASG
TQVRVERPTDTGYWETASKCELQKPVEFVQLVPLTDGGLLAVAAAADTVHLLQPGQEHSV
LHCVYGHPVTCLDTSSSLAAVGVKSHGWAMNAGNKIQVYCLQTGQAVVDLGNSAGDFTCV
NLKDSPPNLLVSGNKDRRVRVFDLRTGKSVASLYAHHLGVSVVQTDDWKIVSGGEEGLLC
LWEMRMGAKLWEMHNRHPVRHAHFNTHTLVTANIPDEKTPRGACITDDDLTAHRRHRGVI
FMYDFSVDTSASDHVLPICKSSYTESTGYNYNIGLAVPYDMLLAEPGSAL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcaggagttccgggagcggtggaagaaagaggtccgagagagagagaggaat
tcgcaggcagggggagatgcagagaaccccgagaatcacaacaagaaccccaaaacttca
gacgagacgctagataaaccaactggggacctcggaaacacagacacgttacaaaacaga
gagggaagtcggaaaagcagcggtgcaaacattcattctagtgcattacaggggacgtct
catcagagctcaagcagcgcgttactggaaacggggtcaggaaccagcaacgccgaacag
acgagcaagatcggtgggtctggagtcagcgacaacagaaaacggagtttgtgttgtaaa
tgcggtgtcccgggcattgcaagcggaccagcgcccctgaacgaggacgctggttcaggc
tgcagttgtcggctcaaactgaaccgcgatgggagctcgttttcgggttctgaatccgaa
gtacagcgtggctcctctctaaaagcagcaagcgaaacgccactgttaagcgacgaatca
cagagtgggaccagtttaaggacttgtcataaccagcaggtcggttcaaaggatcagccc
gaatatatttcaatagcagagagcttgctcgaaggcagaactagccctttgcgggacagg
attgaggtggagaggtcagtggggaagaaaagacacgctgaaaatgtggcaactcgtcga
cctttccaccaacttcagcaacaacccctgtgcaaagttcacaaaaaagaaaccttggta
gatcaattaatacaggacttgaatgaaatcaatgacattcccttctttgatgtggagttg
ccctatgagctggcactaaagatattccagtacctggataggagagagctgggaaggtgt
gcccaggtgagtaaggtgtggaaggtccttgctgaagatgaggtgctgtggtacaggctg
tgcctgaaggaggggcacctggctggagcaagtgtctctgactccccctgctggaaaggc
acactgcgagactacaggcagatgaaggacacgcttcgatccaactggaagaaccgggtt
ggggaagtgaggcagctgcagtatgaactgggcaaggtgctgtgtgatgccagctctagc
aacggacttgttatagctgggtacacgtccggcgatgtccgtctgtgggacacactgaac
tgggattctagtgcctcctatctgcagccgagccacattgctgttgagactgtgctgcgg
ccacatgtcacccacgtcagggtgaatggagctgtggcagttgcagcctatgaggatggc
atcgtggatgtttggagcaccgaggctggtcgagagcctgtccatcattaccagcacctg
cagagggtgcagggccttgccctggggacagagggggccattgtggcaacggcctctggc
acccaagtgcgtgtggagcgcccgactgacacgggctactgggagacagcatccaagtgc
gaacttcagaagccagttgagtttgtacagctggttcccctgacagacgggggtctcttg
gctgtggctgctgctgccgacactgtccacctccttcagcctgggcaggaacacagtgtc
ctccactgtgtctatggacatcctgtcacctgtctggacacctcgtcctcactggcagct
gtgggggtcaagagccatgggtgggccatgaacgccggcaataagatccaggtgtactgc
ttacaaactggccaggcagtggtggatctggggaattcggctggagattttacctgcgtg
aacctgaaggacagccccccaaacctcctggtgtcaggtaacaaggacaggcgggtgcga
gtgttcgacctgaggaccgggaagtctgtggcatctttgtacgcccatcacctgggtgtg
tctgtcgtgcagaccgacgactggaagatagtgagcgggggggaggaggggctgctctgc
ctctgggagatgagaatgggggctaagctttgggagatgcacaacaggcaccctgttcgt
cacgcccacttcaacacgcacactctggtgacggccaacatcccagacgagaaaactccc
agaggagcgtgcatcacggacgatgacctgactgctcaccgcaggcacagaggagtgatc
ttcatgtatgacttctcggtggacacgtcagcctctgatcatgtccttcccatctgcaag
tcgagctacacagagtccactggctacaactacaacatcgggttagcagtgccgtatgac
atgctcctggcagagcctggctcagcactttga
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