Polyodon spathula (Mississippi paddlefish): 121299964
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Entry
121299964 CDS
T07273
Name
(RefSeq) prolargin-like
KO
K08125
prolargin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121299964
Proteoglycans [BR:
pspa00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
121299964
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
LRR_14
LRR_6
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
121299964
NCBI-ProteinID:
XP_041084191
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Position
25:7285662..7292035
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AA seq
369 aa
AA seq
DB search
MRAHLRYFLLLSLLLIAVVCGQRRKPPRPTKPQRRPSPQPEPQEPTDFPPPILGPPSVFE
DCPRECYCPSDFPSTLYCDRRNLRKIPIIPPRAHYLYLQNNYIDEVTEEAFKNATELKWV
NMDNNRIKKVDLQVFEKLENLLFLYMDKNNLQEVPGFLPPNLEQLRLSRNQISKIPAGAF
NKLENLAMLDLHHNKLSDSDLGKNIFKGLKNLVQLNLAHNILRKMPQNVPPNIYQLFLDW
NNIEDIPKDYFKEFPNLTFIRLNYNQLTDKGVPKRIFNISTLLDLHLAYNKLNSVPMINS
KLEQLYINHNNIKSINGTEICPYPIMTIDMSNEDSVPRLRYLRMDGNAVQDPIPMDLIMC
FRHLKSIVI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagagcccatctaagatatttcctccttctcagccttcttctgattgctgtggtgtgt
ggtcagagacgaaaacctcctagaccaacaaaaccacagaggagaccatcaccacagcca
gagccacaagagcccactgacttccctccgcccattttgggtcctccttctgtctttgaa
gactgccccagggagtgctactgtccctcggatttccccagcaccctctactgtgacaga
cgcaacctgaggaagatccccatcatcccacccagggcccactatctctacctccaaaac
aactacatagacgaggtgacagaagaagccttcaagaatgctaccgagctgaaatgggtt
aacatggacaacaaccggatcaagaaggtggacctccaggtctttgagaagctggagaac
cttctcttcttgtacatggacaagaacaatctccaagaggtgcccggtttcctgcctccc
aacttggagcagcttcgtctgagcaggaaccagatctccaagatccctgccggagcgttt
aataagctggaaaacctggccatgcttgaccttcaccataacaagctgagcgacagcgac
ctgggcaaaaatatcttcaagggcctcaagaacttggttcagctgaacctggcacacaac
attctgagaaagatgcctcagaacgtgccacctaatatctaccagctgtttctggattgg
aataacattgaggacattcccaaagattatttcaaagagttcccaaacctgaccttcatc
aggcttaattacaatcagctgaccgacaaaggggtgcccaagaggatttttaacatctcc
actctgttggatcttcaccttgcctacaataaactcaacagtgttcccatgattaattcc
aagttggagcagctgtatatcaaccacaataatatcaaaagcatcaatggcacagagatc
tgcccatatcctatcatgaccattgatatgagtaatgaggacagtgtccctcgtctgcgc
tacctgaggatggatgggaatgcagttcaggatcccattccaatggacctgatcatgtgt
tttcgacatctgaaatcaatcgtcatctaa
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