Polyodon spathula (Mississippi paddlefish): 121299965
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Entry
121299965 CDS
T07273
Name
(RefSeq) fibromodulin-like
KO
K08121
fibromodulin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121299965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121299965
Proteoglycans [BR:
pspa00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
121299965
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_5
LRRNT
LRR_14
LRR_LRWD1
LRR_6
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
121299965
NCBI-ProteinID:
XP_041084194
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Position
25:complement(7254848..7258476)
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AA seq
352 aa
AA seq
DB search
MRLVPVLLIAGACEVVMCQAQDSFFWLSYLQRQFGYTDYSGQVAASLRARDCPLECDCPP
SFPISMYCDSRNLKHIPFVPSRMKYVYLQNNRISSIQDGAFDNATGLVWIMLHRNQLTMD
KIGKTVFSKLQNLDRLYLDHNNLTRVPTPLPRSLSDLRLSNNKINKIQPNTFEGLESLTS
LLLNNNQIPDIGTALKGLKSLSLLDLSNNKLKNLPGNLPGRLHQLYLEFNKINTIPHDYF
RKFPKLQYLRLSNNKLTDEGIPSNTFNITSLIELDLSYNRLQKIPSVNTNLEHLYLQANE
ITEFSINSFCQVIDIMSFSRLQVLRLDGNKIAHNKIPPKAALCLRLATIIDV
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttgtcccagtcctgctcatcgctggagcttgtgaagtagtgatgtgccaggca
caagacagcttcttctggctgtcttacctgcagcgccagtttggttacaccgattactct
gggcaggtggcagccagcttgcgtgccagggattgccccctggagtgtgactgccctccc
agcttcccgatcagcatgtactgtgacagccgcaacctcaagcatatccccttcgtgcct
tcccggatgaagtatgtgtacttacagaacaaccggatcagctccattcaggacggggct
tttgacaatgcaaccgggctggtctggatcatgctacacaggaaccagctaaccatggac
aagatcgggaaaacggttttctccaagctgcagaacttggatcggctctatctcgaccat
aacaaccttactagagtgcccaccccactgccgcgatccctgagtgacctcaggctgtcc
aacaacaagattaacaaaatccagcccaacacgttcgaaggactggagagcctgacttcc
ttattactcaacaacaaccagatccctgacatcggaacagctctgaaggggctgaaatca
ctgtcccttctggatctgagcaacaacaagctgaagaacctgccggggaatcttccaggc
cggcttcaccagctctatctggagtttaataagatcaacaccattccgcatgattatttt
aggaaattccccaaactgcagtatttgagactctcaaacaacaagttgactgacgaaggg
attccctccaacactttcaacatcaccagtttgattgagctggatctctcctacaacagg
ctgcagaagataccctcggtgaacaccaatctggagcacctctacctgcaagctaatgag
atcacagagttctcaatcaacagcttctgccaggtgattgacatcatgagcttctctcgg
ctacaagtcctgcgactggacggcaacaagatcgcgcacaacaagatcccaccaaaggcg
gcgctgtgcctacgcctggccaccatcatcgatgtgtag
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