Polyodon spathula (Mississippi paddlefish): 121299988
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Entry
121299988 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30-like isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121299988
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121299988
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121299988
04121 Ubiquitin system [BR:
pspa04121
]
121299988
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121299988
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121299988
Membrane trafficking [BR:
pspa04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
121299988
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121299988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
121299988
NCBI-ProteinID:
XP_041084228
LinkDB
All DBs
Position
25:20134135..20140766
Genome browser
AA seq
507 aa
AA seq
DB search
MQCRLEAAARLAREFVRTGSAVRNKMVKNWGVIGGVAAAVAAGVYVLWGPVTERKKRKKG
MVPGLLNLGNTCFMNSLLQGLAACPSFIRWLDELTEGYNQDQNQQQQHPKLARTLLQLLR
ALSTQELAEGDVLDAGKLLEALRSYRWQISSFEEQDAHELFHVLTSSLEEEERDRHPRIT
HLFDVQSLESAVGMDEKNLSCRSRGPLHPLPNSWQSQHPFHGRLTSNMVCKRCDQQSPVR
YDSFDSLSLTIPTTTWGRPVTLDHCLQHFISSETIKDVECENCTKIHASGVLNRQVVESQ
RSTFIKQLKLGKLPQCLCIHLQRLTWSSQGTPIKRQEHVHFTEFLSMDSYKHRTVGRRSQ
RQNRAARTSILEDTRVSPKPSDPDQSNNNKKPLTNGACPGYLPPSTTSPPFALTYECSSS
VYLFRLSAVLVHHGDMHSGHFVTYRRSPPSPKNPSAFSSQWLWVSDDSVRKANLQEALSS
NAYLLFYERVRPAPSLLRPSPRLTPEE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcaggctggaggcagcagccaggctcgccagggagtttgtgcggacgggatct
gcggtcagaaataaaatggtgaagaactggggagtgattggtggcgtagcagccgctgtg
gctgctggagtttatgtgctgtggggacccgtcacggagagaaagaaacggaagaagggc
atggtacccgggctcctgaacttggggaacacctgctttatgaactccctgcttcagggc
ttggcggcgtgtccctcctttatccgctggctggacgagttaacagaggggtacaaccaa
gaccagaaccagcagcaacagcaccccaagctggccagaaccctcttgcagcttctcagg
gcattgtccacgcaggagctggcggagggtgatgtcctggatgcagggaagctgctggag
gccctcaggagttacagatggcagatcagctcatttgaagagcaggatgcacacgagctc
ttccacgtgctcacttcctctctggaggaggaggagcgggacaggcatccccgcatcact
cacctgtttgatgttcagtctctcgagagcgccgtagggatggatgagaaaaacctcagc
tgcaggagtcgaggacctttgcatccattaccaaactcgtggcaatcccagcatcctttt
catggacgactgaccagtaacatggtgtgcaagcgctgtgaccaacagagtccagtccga
tatgattcgtttgacagcctctcgctcaccattcctacgacaacttggggtcggcctgtc
acgctggatcactgcctccaacattttatctcttccgagacgatcaaagatgtggagtgt
gagaactgcaccaagatccatgcaagtggagtgttaaatcgacaggttgtggaaagccag
aggtcaacttttatcaagcagctcaaattggggaagctgccccagtgcctgtgtattcac
ctgcagaggctgacctggtccagccaaggcacgcccatcaagcggcaggagcatgtgcac
ttcacagagttcctgtccatggactcctacaagcacagaacagtgggtcgaaggtcacag
cgacagaaccgggcagccaggacaagcattctagaggataccagggtgtctcccaaaccc
tcagatccagatcaatcaaacaacaacaaaaagccactgacgaatggagcgtgcccagga
tacctccccccctccacaacaagccccccatttgccctcacctacgagtgcagttcgtct
gtctatctcttccgattgtcagctgtgttggtacatcacggggacatgcactcaggacac
tttgtcacctaccgccgctcccctccatctcccaagaacccctctgccttcagcagccag
tggctgtgggtgtctgatgactctgtacgcaaggccaacttgcaggaggcgctctcctcc
aacgcctacctgctgttctacgagagggtccggccagccccctcccttctgcgccccagc
ccgaggctgacgcctgaggagtga
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