KEGG   Polyodon spathula (Mississippi paddlefish): 121299995
Entry
121299995         CDS       T07273                                 
Name
(RefSeq) splicing factor 3A subunit 1-like
  KO
K12825  splicing factor 3A subunit 1
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121299995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pspa03041]
    121299995
Spliceosome [BR:pspa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    121299995
 Complex B
    121299995
 Complex C
   U2 SnRNP specific factors
    121299995
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 121299995
NCBI-ProteinID: XP_041084244
LinkDB
Position
25:16768862..16779148
AA seq 784 aa
MPPGPVQIALPDSNNKVEETKDEPPVSKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKALEPSAAVPKVMQQQALQNASQQQ
LPQKVQAQVIHETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQ
KEQRNYQFDFLRPQHSLFNYFTKLVEQYTKVLIPPKGLLQKMKREAENPREVLDQVRYRV
EWAKFQERERKKEEEEREKERVSYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGAR
ILIQERYEKFGESEEVEMEVESEDEDNEPEERREPPPTHLDQDTQLQDMDEGSDDEEDSM
KAPPPPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPPAPVSDEYLISPITGEKIPASKMQ
EHMRIGLLDPRWLEQRDRSIRERQIEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGK
KIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEKIG
PSKPTDKPQPPMTSSAPNMPSSAPPASVPRPPLIPPPVRTTLVSTLPVMQRPSMVRLGPG
QVLASMPPMIHAPRINVVPMSPSGHLMAPRPPPMVVPAAFVPAPPVPQPPSSAPAPMPPA
RPPPPPHEDEPASKKMKSEDNLIPEEEFLHRNKAPVTVKVQVPNMQDKTEWKLNGQLLTF
TLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMVNSSMIHLALKERG
GRKK
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgcctccagggcctgtacagatcgccctgccggacagcaacaacaaggttgaggaaaca
aaggatgagcccccagtgtcgaaacccattgttgggatcatttatcccccgccagaggtt
cggaatattgtggataagactgccagcttcgtggccaggaacggaccagaatttgaagcc
aggatccgtcagaatgaaattaacaatcccaaattcaacttcctgaaccccaatgatccg
taccatgcatactaccggcacaaggtgaatgagttcaaggaggggaaggcgctggagccc
tcggcggccgtgcccaaggtcatgcaacaacaggcactgcagaacgcttcccaacagcag
ctgccacagaaggttcaggcccaggtgatccacgagactgtggtgcccaaggagcctcct
cctgagtttgagttcatcgcggaccccccctctatctccgctttcgacctggatgtggtg
aagctcactgcccagtttgtggctcgcaatggcaggcagttcctcacccagctaatgcag
aaagagcagcgcaattaccagtttgacttcctgcggccccagcacagcctttttaactac
ttcaccaagctcgtggagcagtacaccaaggtccttatcccacctaaaggattgctgcag
aaaatgaagagggaagcagagaatccacgagaggtgcttgatcaggtgaggtatcgagtg
gagtgggcaaagtttcaggagcgcgagagaaagaaagaggaggaggagagggagaaggag
cgggtatcttacgcccagatcgactggcatgactttgttgttgtggaaactgtggacttc
caacccaatgagcaaggtcacttccctcctcccaccaccccagaggagctgggcgcccgc
atcctgatccaggagcgctatgagaagttcggggagagtgaggaggtggagatggaggtg
gagtctgaagatgaggacaatgagcctgaggagaggcgtgagcctccaccgacacacctg
gaccaggacactcagctccaagacatggacgagggttccgatgatgaagaggacagtatg
aaggccccgccgcccccggataaccccatgcccccaccactgcccccaacccctgaccaa
gtcatcatccgcaaggactacgaccccaaagcctccaagccccagcccccagcgccggtc
tctgacgagtacctcatctcccccatcactggagagaagatcccagccagcaagatgcag
gagcacatgcgcatcgggctactggacccgcgctggctggagcagcgagaccgcagcatc
cgggagaggcagattgaggacgaggtgtacgcccctggcctggacatcgagagcagcctg
aagcagcttgccgagcgccgtaccgatatcttcggtgtggaggaaacggctatcggcaag
aagatcggggaagaggagatccagaaaccggaagagaaagtcacatgggacggtcactct
ggcagcatggcgcgcacccagcaggctgcacaggccaacatcacactgcaggagcagatc
gaggccatccacaaggccaaggggctggtccccgaggatgacagcaaggagaagatcgga
cccagcaagcccaccgacaagcctcagccgcccatgacctcctctgcacccaacatgccc
agctctgctccacccgcctccgtgccccgcccgccactgattcctcctccagttcgaacc
acgctggtctcgactttgccagtgatgcaacgtccctcaatggtgcgtttgggcccaggt
caggtgctggcttccatgccacctatgatccatgcgcctcgcatcaacgtggtgcccatg
tctccctcggggcacctcatggcacctcgtccaccccctatggtggttccagcagcattc
gtgccagcgcctcctgtgcctcagccccccagctcggccccagcgcccatgccccccgcg
cgccccccccctcctccacacgaagacgagcctgccagcaagaagatgaagtcagaggac
aacctcatcccagaggaggaattcctgcacagaaacaaggcaccagtaacagtgaaggtg
caggttcccaacatgcaggacaaaacagaatggaagctaaatgggcagctgctcactttc
acactcccgctcacagaccaggtgtcagttataaaggttaaaatccacgaagccaccggc
atgccagctggtaaacagaagttgcagtatgagggtatcttcatcaaagactccaactcg
ctggcttactacaacatggtcaacagctcaatgatccacctggccctgaaggagagaggt
ggcaggaaaaagtga

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