Polyodon spathula (Mississippi paddlefish): 121300028
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Entry
121300028 CDS
T07273
Name
(RefSeq) huntingtin-interacting protein 1-related protein-like isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121300028
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
121300028
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
TCTP
Motif
Other DBs
NCBI-GeneID:
121300028
NCBI-ProteinID:
XP_041084305
LinkDB
All DBs
Position
25:complement(19492466..19520132)
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AA seq
1069 aa
AA seq
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MINTIRQVPSKVLNRRSTNTLEAEREQFDKVQCISISKAISSSEAPVKEKHARRIILGTH
HEKGAFTFWSYAIGLPLPSSSIISWKFCHVVHKILRDGHPNVLQDCLRHQSNIREMGSLW
GHLHDKYGQLVAIYSSLLINKMNFHAKRTQFPGNLELQDEELEKAAGTDINYVFQFTVDL
FDYLGCELKLAETVFRQLNTSIAVSQTSSGQCRLSPMIQVIQDCSHLYHYIVKLLFKLHA
CLPVETLQGHRERFHDQFHSLKNFFNRARDMLYFKRLIQIPKLPDNPPNFLRASALAEHV
KPVVVMSDEVPDDEEPEALIEVTSAPQTQQQNVVDMFDQAFGPPSNGFDDRDVQIDNLKR
EVEMLRAELERIKSEAQRYITQLKSQINSLEEELEEQRTQKQKALVENERLRMELESLRR
LRAEGESQLGQVLEAEKRAQATEQRYNKLKDKHNDLVSSHAELLRKSADTSKMLSATQQS
QEEVARTKQQLAFEMEQIRQASEMKIEEQNVQLERLRRELEASRAELSHIQSTLQSSEQS
GQKLSSMLGSLQEEEGVLRKKMAQQEAELCSLKSEVQQSQSSLQQERERSSRELGELQGK
LREKSSQEDLLQQKLLDEQFRLLQGTVAEAENIIQDAVARLDDPLHVRCTSSPDYLICRA
EATLGCIDSVQRGHAEYLKNMGDAGSLVRPLTQFAHLTADTIVNGSATAHLAPTDHADKL
TDSCRDCGDVSLQFLKDMKTKESLAHASPEAIRLIIEKILQLGKDLRPRSMDFNQEELGD
MVNKEMAATSAAIEEAVRRIEEMMDQARKDSSGVKLEVNERILNSCTNLMKAIHLLVMAS
TELQREIVDSGRGAATQKEFYAKNSRWTEGLISASKAVGWGATQMVESADKVVLHMGKYE
ELIVCSHEIAASTAQLVAASKVKADPHSKKLTKLQQASRNVNDMAANVVASTKSGQEQIA
DKDTMDFSGMSLIKLRKEEMESQVKVLELETQLQGERRRLGDLRKKHYELAGVCDFSSEE
GVLVKGAPSSLTNKPSILKKPTMAQKPTIPPKNNLLNIDDGLYKAHLLN
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgattaatacaatcagacaggtaccttccaaggtactaaaccggagatccacgaacact
ttggaagcggagagggagcagtttgacaaggtgcagtgcatcagcatcagcaaagccatc
agctcgagcgaggcccctgtcaaggagaaacatgcacgcagaattattttggggacacac
catgagaaaggcgccttcaccttctggtcctacgccatcggcctcccgctgcccagcagc
tccatcatcagctggaagttctgccacgtcgtgcacaaaatcctccgcgacgggcacccc
aatgtcctccaggactgcctgagacaccagagtaatattcgggaaatggggagcttgtgg
ggtcatttacatgataagtacggacagctggtggcgatatactcctcgcttctgatcaac
aagatgaatttccatgcaaagcgcactcagttcccaggaaacctggagctgcaggacgag
gagctggagaaagctgctggaacggacatcaattacgttttccagttcacagtggacttg
tttgattacctgggctgcgaactgaagcttgctgagactgtgttcaggcagctcaacacc
tccatcgctgtgtctcagacttcctccgggcagtgcaggctgtctccaatgatccaggtg
atccaggactgcagccacctgtaccactacatcgtcaagctgctcttcaaactgcatgcg
tgtttgccggtggaaacgttgcagggtcacagagagcggttccatgaccagttccacagc
cttaaaaacttcttcaatcgagcgagagacatgctgtacttcaagagactgatccagatc
ccaaagctgcctgataaccctcctaatttcctgcgcgcctcagcgttggcagagcatgtc
aagcctgtggtggtgatgtctgatgaagtgccagacgatgaagaaccagaggctctgata
gaggtcacctccgccccgcaaacccaacagcagaatgttgtggatatgtttgaccaggcc
ttcggacctccgtccaacggttttgatgaccgggacgttcagatagacaacctgaagcga
gaagtggagatgctgagagccgagctggagaggatcaaatccgaggcccagcgctacatc
actcagctcaagtctcagatcaacagcctggaggaggagctggaggagcagcgcacgcag
aagcagaaggcgctggtggagaacgagcggctgcgcatggagctggagagcctgcggagg
ctgcgggccgagggggagagccagctgggacaggtcctcgaggcagagaagagagcccag
gccacagagcaacgctacaacaagctgaaggacaagcacaatgatctggtcagcagccac
gcagagctactcagaaagagtgcggacacttcaaaaatgctgagcgcgacccagcagtct
caggaggaggtggcccgaaccaaacagcagctggcctttgagatggagcagatcagacag
gcgtccgagatgaagattgaagaacagaatgttcagctggaaagactccgaagggaactg
gaggccagccgggctgaactgtcccacattcagagcacgctgcagagctctgagcagtct
gggcagaagctgagcagcatgctggggagtctgcaggaggaggagggggtgctgaggaag
aagatggcacagcaggaggcggagctctgctctctgaagagcgaggttcagcagagccag
tcctcactccagcaagagagggagaggagctctcgggaactgggggagctgcaggggaaa
ctgagggagaagtcgagccaggaggatcttctccagcagaagctcctggatgagcagttc
aggctgctgcaggggacggtggcagaggctgagaacatcatccaggacgccgtggcccgg
ctggacgaccccctgcatgtccgctgcaccagctccccagattacctgatctgcagggca
gaggccacgctgggttgtatcgactctgtgcagcgtggacacgcggagtacttgaagaac
atgggagatgctgggagcctggtgcgacctctcactcagtttgcccacctgactgcagac
accatagtgaatgggagtgccactgcacacctggcccccactgaccatgccgataagctt
actgacagctgcagggactgtggggatgtaagcttgcagtttttgaaagacatgaagacc
aaagagtctttggcacatgcgagcccggaggctatcagactgatcattgagaagatcctg
cagctgggcaaggacctgaggcctagaagcatggacttcaaccaggaggagctgggagac
atggtgaacaaagagatggcagctacttcagcggccattgaagaggcagtcagaagaatc
gaggaaatgatggaccaggctagaaaagacagttctggagtgaagctggaggtcaatgaa
agaattctgaactcctgcacaaacctgatgaaggctatccacctgcttgtcatggcctca
acagaactacagcgggagattgtggacagtggacggggggcagcaacacagaaggagttc
tatgctaagaattctcgctggacagaaggtttgatttctgcatccaaagcagtgggctgg
ggagcaactcagatggtagagtctgcagacaaggttgttctacacatgggaaaatacgaa
gagctgattgtgtgctcacacgagattgcagcgagtacagcgcagctcgttgctgcttcg
aaggtcaaggctgacccccatagcaaaaaactcactaagctccagcaggcatctcgcaat
gtcaacgatatggctgccaatgtggtggcctcaaccaaatctggacaggaacagattgca
gacaaggacaccatggatttctccggcatgtccctgattaaactccggaaggaagagatg
gagtcccaggtgaaggttttggagcttgagacccagcttcagggtgagaggaggcgtctt
ggcgatctgaggaagaagcactatgagctggccggggtgtgtgatttttcctctgaggag
ggagtcctggtcaagggagccccatcatctttgacaaataaacccagcatccttaagaaa
cctacaatggctcaaaaacctaccattccccccaagaacaatctgttaaatatcgatgac
ggactctacaaagcacatttgctgaattaa
DBGET
integrated database retrieval system
