Polyodon spathula (Mississippi paddlefish): 121300085
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Entry
121300085 CDS
T07273
Name
(RefSeq) transcription initiation factor TFIID subunit 11-like
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121300085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121300085
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121300085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
121300085
NCBI-ProteinID:
XP_041084412
LinkDB
All DBs
Position
25:5652804..5657750
Genome browser
AA seq
200 aa
AA seq
DB search
MADPMVKMEADPMAVDPDAGHQQGAIEPSPAAWDPKEIKVEDEEQQGSFKEAGLGEQGEQ
GEQSSEGPQAKKLKVEPEKRREKRQKVDEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPK
AAIKRLIQSITGSSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAV
RRLKTRDQIPNTKHKRVLLQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccgatggtgaagatggaagcagacccgatggcggtggaccccgacgctgga
caccagcagggagcgatcgagccatcacccgccgcctgggaccccaaggaaatcaaagtg
gaggacgaggagcagcagggctccttcaaagaggctggtcttggggagcagggggaacaa
ggggagcagtcctctgagggcccccaggccaagaaactaaaagtggaaccggagaagagg
agggagaagcggcaaaaagtggatgaggatgagatccagaaaatgcagattttagtgtcg
tccttctcggaggagcagctcaatcggtatgagatgtaccgcagatcagcctttcctaaa
gcggctatcaaaaggctgatccagtcaatcacaggctcctctgtgtctcagaatgtggtc
atcgccatgtccggcatttcaaaggtgtttgtcggggaggtggtggaggaagctctggat
gtgtgtgagaagtggggggagatgcctccgctgcagcccaagcacatgagagaggcggtg
cggagactgaagacccgagaccagatccccaacaccaagcacaaacgcgtcctgctgcag
tga
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integrated database retrieval system
