Polyodon spathula (Mississippi paddlefish): 121300092
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Entry
121300092 CDS
T07273
Name
(RefSeq) protein HIRA-like
KO
K11293
protein HIRA/HIR1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121300092
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
121300092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
HIRA_B
Beta-prop_HPS5
NBCH_WD40
WDR90_beta-prop_4th
WD40_like
Motif
Other DBs
NCBI-GeneID:
121300092
NCBI-ProteinID:
XP_041084422
LinkDB
All DBs
Position
25:21997266..22013245
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AA seq
1017 aa
AA seq
DB search
MKLLKPSWISHNGKPIFSVDIHPEGTKFATGGQGEDSGKVVIWNMAPILREEDEKNETIP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLIMVWKRAAYIGPSTVFGSSSKLANVEQ
WRCVTILRSHTGDVMDVAWSPHDAWLASCSVDNTIVIWNARKFPEIIATLRGHTGLVKGL
TWDPVGKYVASQADDRNLKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSPKPSCPYCCC
AVGSKDRSVSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGTVAYLDFSQD
ELGDPLNEDEKNSIHQKIYGKSLAITTEAQLPTTIIENPEMLKYQQQKQQAEQRSAASRE
THTPKLTSVVNGESLEDIRKNLLKKQVETRTPDGRRRITPLCIAQLDTGDFSPALFNSVP
ILPGSTMSSQLTQQLTSSDSNTANSLSLKPCPEPTANAAPRPADDALHKEGVNATATTLS
AVANSIAVKPNSLTSAAKIEPMKALDSRFTERSKATPGVAVSSLVSLAPLNRVKDANALK
DPKPRITCLDSSSDSEGKMKAPSLALNKRKIEMEGGEVVEKRKKGRPRKDTKILPMSAAM
LQTAPTTDKDPPRVIVPMAVLKLPTPAPQKAFTLQVSSDPSVFIEVENEVSTAAGSRLSR
LKCNREGKVWETVLTSRVLTAAGSSDVIGVACEDRTLSVFSACGRRLLPAILLQAPMSTL
HCSGCYVMALTACATLSVWDVQKQSVLVKNESLQIILSGTDTTVSQSLLTRHGVPVVSLA
NGKSYCFNSALGTWNLIADKQDSLVQCADYRNCIPSQEAMLSSGPLAIVQGHSLNAGRQA
SRLSATPHLLQQGMTLAYLENQMASALTLKSGPEYRHWLLIYARFLVNEGSQYRLRELCK
DLLGPVHKSAASVWETTVLGLRKRDLLKEVLPVIGQNLQFQRLFTEYQDQLELLKNK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgttgaagccaagttggatcagtcacaatggaaagccaatattttctgttgac
atccatccggagggaacaaaatttgcaacaggaggacaaggagaggattctgggaaagtt
gtcatatggaatatggccccaatcctccgagaagaggatgagaagaacgagaccattccc
aagatgctttgccagatggacaaccatttagcttgcgtgaactgtgtgcgctggtccaac
aatgggctgtacctggcttcaggtggggacgacaagctgataatggtgtggaaacgagca
gcgtacattggccccagcactgtgttcggctccagcagtaaactggccaatgtggagcag
tggagatgtgtaaccatactgaggagtcacactggagatgtcatggacgttgcttggtca
ccacatgatgcctggctcgcctcctgtagcgttgacaataccatcgtcatctggaacgct
cgcaaatttccagagatcatcgctaccctgcggggtcacactggcctggtgaaggggctg
acctgggaccctgtggggaagtacgttgcctctcaggccgacgaccgcaacttgaaggtg
tggcggaccatggactggcagctggaaaccagcataaccaaaccgttcgacgagtgtggt
ggaaccactcacgtgctgcggctcagctggtcccctgacggtcagtatctagtctccgct
cacgccatgaacaactccggccccacagcgcagatcattgagagggacggctggaagacc
aacatggactttgtgggccatcggaaagcagtgactgtagtgaaattcaaccctaagatt
ttcaagaagaagcagaagaacggcagctctcccaagcccagctgcccgtactgctgctgt
gctgtgggcagtaaggaccgctctgtgtctgtgtggctcacttgcctgaagcgccccctt
gtggttatccatgagttatttgacaagtctatcatggatatctcatggaccctcaatggc
ctggggatcctggtgtgctccatggatgggactgtggcatacctggatttctctcaggat
gagcttggggatccactcaacgaggacgagaagaactcgattcaccaaaagatttacgga
aaaagcctggcgatcaccacagaggctcagctgcccaccactatcatcgagaacccggag
atgctgaagtaccagcagcagaagcagcaggctgagcagaggagcgcggccagcagggag
acgcacacgcccaagctcaccagcgtggtgaatggggagagcctggaagatatcaggaag
aatttgttgaaaaagcaggtggaaacgaggacaccagatggccgaagacggatcacccct
ctatgcattgctcagttagacacaggggacttctccccagccctgtttaacagtgtcccg
atccttcccggctcgaccatgtcctcccagctcacccagcagctgacctcctcggactcg
aacacggccaactccctcagcctgaagccgtgtccggagcccacagccaacgctgccccc
aggcctgcagacgatgcactgcacaaagagggcgtcaatgctacagccaccacgttgtca
gccgttgcaaactccattgcagtgaaaccaaactctctgacctctgctgccaagattgag
ccaatgaaagcacttgattccaggtttaccgaaagatcgaaagccacgcctggagtagct
gtatcctctcttgtcagtctcgccccccttaatagagtaaaagatgcaaatgctcttaag
gacccgaagcccaggattacatgtctggacagcagcagcgacagcgaggggaaaatgaag
gcaccgtctctggccttgaataagaggaagatagagatggaggggggcgaggtggtcgag
aagagaaagaagggaagaccgaggaaagataccaaaatactgccgatgagtgcagccatg
ctgcagactgcgcccacaacagacaaagatccccccagagttattgtgccaatggcagtg
ctgaagctgccaacaccagccccacagaaagctttcactctacaggtcagctcggacccg
tcggtgttcattgaggtggagaatgaggtctccactgccgcggggtccaggctgagcagg
ctgaagtgtaaccgcgagggtaaagtgtgggagacggttctcaccagtcgggtcctgact
gctgctggaagctcggatgtaatcggagtggcctgtgaggacaggacgttgtcagtattc
tctgcctgtgggcgccggctgctcccagccatcctgttgcaggcgcccatgtccacgctg
cactgttcgggctgctacgtgatggccctcactgcctgtgccacgctgtcagtctgggat
gtgcagaagcagtcggtactggtcaagaatgaatcgctacagattattttgtcaggaaca
gataccacagtctcccagtccttgttgacccggcacggagtcccggttgtgagcctggcc
aatggaaagtcttactgtttcaactccgctctcgggacatggaatctgatagcagacaaa
caggactccctggtgcagtgtgcggattataggaactgcatcccttcccaggaggccatg
ctgtcctctggacccttggccatcgtgcagggtcatagtttaaatgctgggaggcaagcg
tccaggctgtcagccacaccacacctcctgcagcagggaatgacactggcctacctagag
aaccagatggcatcggcacttacattgaaatctggtccggagtacaggcactggctgctc
atctacgcacggttcctggtaaatgaaggatcgcagtatcgcttacgagagctctgtaaa
gatttgttgggtcctgtacacaagtcagcggcaagcgtttgggagacgactgtgctggga
ctgaggaagcgagaccttctcaaagaggtgcttccagttataggccagaatctgcagttc
cagaggcttttcacagaataccaggaccagctggagctgctgaaaaacaagtag
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