Polyodon spathula (Mississippi paddlefish): 121300111
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Entry
121300111 CDS
T07273
Name
(RefSeq) sphingomyelin phosphodiesterase 4-like
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00600
Sphingolipid metabolism
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121300111
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
121300111
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
121300111
NCBI-ProteinID:
XP_041084446
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All DBs
Position
25:complement(18207798..18217152)
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AA seq
795 aa
AA seq
DB search
MPSPPLQQSSFFLASLKADYLNKPFLQRCQDLVKVIDDYPAMELHLLFTWLVESVFGSLD
GSIVGWNLRFVQARTNEYNTIMEFLDPNGPMMKLVYKLHAEEYKYEFPIVYLPGPVRASI
QTGVLPDCPIFHNKLQFSPSGLLSLSLSLNPFEYYMFYFAASLMVQRSYLPEQHFSAKDS
AYFVLVDSYLKYFLPTEGNVPPSLVPIVRGTVSPPPPSCRSPTVPFIGCGVHHTSLLKRH
ISHQPSMNTDPAAQELWRSETILQVFIEMWLHHYSLEMYQKMQCLQVKEPICPTEEHVLV
VRLLVKHLHSFSSSQRPELITSSPSTHSHSSPLEEFKRVVIPRFVQQKLYVFLQHCFGHW
PLDASFRAVLETWLSYLQPWRYTPEKQSPYMDNQDRTVPDKWAAFVQENLLMYTKLFQGF
LNRTVRTDLVNPKNALMAFRVAKVFAQPNLSEMIQKGEQLFLEPEHVLHHRQHRFLTPSL
GGSFLSSRQPFITDSVFKVKSHVYSLEGQDCQYKQMFGAEVRNTVLRLSQLIAQAKQTAK
SISDHSAEAAANQSFLSWFGFESSDLNTSYVGNDIDYMGLDSIKKTDEYLDRTLDYVCQI
FKLNSAQLSQLMVSFVSTKDDGGLKQLPDCIQEPNGLLLTDLGRLQMINGLRKFDINYQG
DPELQPIRSYESAVLVRLLYRLSSLINERFAGEMRSLCSRRDFSSQLARYYLTTSSVAET
SKRSPLTRRSLERRPQPRISLRYLASYRTLLSIFMLYVIASFFGFGPVSFIFSGLLACFC
HGVVMTMFADKQKTH
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccctcccttgcagcagtccagcttctttcttgcgagtctgaaagcagattac
ttgaacaagccttttcttcagcgctgtcaagatctagtcaaggttatcgatgactaccca
gctatggagctgcacttgcttttcacctggctggtggagagtgtgtttggcagcctggat
ggcagcattgtgggttggaatctgcgctttgtgcaagcacggactaatgagtacaatact
attatggagttcctcgatcccaatggcccaatgatgaaactggtgtacaaattacatgct
gaggaatacaagtacgaatttccgatcgtctatctcccaggtcctgtaagggcttcaatc
cagacaggtgtcctgccagattgcccgattttccacaacaagctccagttctcaccttca
ggactcctgagcctcagcctctctctcaatccctttgaatattacatgttttattttgca
gcaagcctcatggttcaaagaagctacctaccggagcagcactttagtgctaaagacagt
gcttattttgtgctggttgacagttacctgaagtatttcttacctacggaggggaacgtt
ccaccttctcttgttccgatcgtcagaggaacggtgtcacctccgcctccaagttgtagg
tccccgacagtgcccttcataggctgtggtgtccaccacaccagcctcttgaagcgacac
atttcacaccagccctctatgaacacagaccccgctgcccaggagctctggaggtctgaa
actattcttcaggtgtttatcgagatgtggcttcaccattactccctggagatgtatcag
aagatgcagtgtctgcaggtcaaggagcccatctgccctacagaggagcatgttctggtg
gtgagactcctcgtgaaacacctccattccttctccagcagtcagagaccagagctgatc
acctcgtccccctctacacactctcactccagcccactcgaggagtttaaacgggttgtg
atccctcgctttgtgcagcagaagctgtacgtgttcctccagcactgcttcggtcactgg
ccccttgatgcttccttcagagcagttttagaaacatggttaagttacttgcagccatgg
agatatacccctgaaaagcagagcccctacatggacaatcaggaccgcactgtgccagac
aaatgggctgcctttgtgcaggagaatttgttaatgtacaccaaactgttccaaggattt
ttaaacagaaccgttaggactgaccttgttaacccaaaaaacgcactgatggctttcaga
gtggcaaaagtctttgctcagcctaacctatcagaaatgatccagaaaggtgagcagctg
tttctggagccggagcatgtccttcatcacaggcagcaccgcttcctgacgcccagcctc
ggcggcagcttcctgtcctcacggcagcccttcatcacagactccgtcttcaaggtgaag
agtcacgtctacagcctggagggccaggactgccagtacaagcagatgtttggagccgaa
gtgcgcaacacggtgttgcgactttcccagttaatagcacaagccaaacaaacagcaaaa
tccatatcggatcattctgcggaagcagctgctaaccagtcattcctctcgtggtttggg
ttcgaatcttcagatctaaacacctcctatgtggggaacgacatagattatatgggactg
gacagcataaagaagacagatgaatacttggacagaacactggactacgtctgtcagata
tttaagctgaattcagctcagctgtcccagctgatggtgagttttgtgtcgacgaaggac
gatggtggattgaagcagcttcctgactgtatacaggaaccaaatggattattgctaaca
gatctggggaggttgcagatgatcaacggactgcgcaagtttgacatcaactatcaagga
gaccctgaattgcagccgataagaagttacgaaagtgctgtgctggttcgtctcttgtat
cggctgtcatctctgataaacgagcggtttgcaggagagatgcgttcgctttgttcaaga
cgagattttagcagccagctagcccgttattatttgactacgtcgtccgtggcagagacg
tcaaagcgaagccccttgacacgccgcagcctagagagacgaccccagccacggatcagc
ctgagatacctggccagctaccgcaccctgctctccatcttcatgctctatgtaatagcc
tcctttttcggctttgggcctgtgtcatttatcttctcggggctgcttgcatgtttttgt
catggagttgttatgacaatgtttgctgacaagcaaaaaactcattaa
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