Polyodon spathula (Mississippi paddlefish): 121300112
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Entry
121300112 CDS
T07273
Name
(RefSeq) UHRF1-binding protein 1-like
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BLTP3A_B
VPS13_N
DksA_N
Motif
Other DBs
NCBI-GeneID:
121300112
NCBI-ProteinID:
XP_041084448
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All DBs
Position
25:complement(3462741..3481509)
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AA seq
1385 aa
AA seq
DB search
MAGIIKKQILKHLSRFAKNLSPDKINLSTLKGEGQLSNLELDEEVLQNMLDLPTWLAVTR
VYCNKAAIRIQWTKLKTSPICLLLDKVEVEMRTCEEPRPPNGPSPIAITAGQSEYGFAEK
VVEGMSVLINSITIKVQAQAFHASFELWQLQGNSLNPKWQRSDLRYTRITDPLRGEVLTF
KEINWQTLRIEADAMESGEQDLGSTPLRLITNQGRIRIALKRRVKDCNVVASKLLFILDD
LLWVLTDSQLKAMIRYAKSLSEAIERSAQQRKSMAPDPLQRVPTSPGAPPPWNEPAPHAA
PPSGVPNSLSQYFEQHDVKESSYHTLISRLDLHICDDSSDSEAGGQQPRVAGGAIQLTFH
KLGFDYYPFHWPSDGCRHWERYCGAMETRAQWVSKLLQDFQRQAEGQDRQTGSPVQGKGT
PTRTQDGGSTPKSSPPDRAQTPRRTSAALPPHGLPWKRLRSSCLLIRVDDLDIYQVSSKG
RHSKKPQTLVSCNRKSLQLPDNVSAIHIQFTEYYFPDHSHLPVPCSNLYGQLNGLQLTPD
PLSLLWINLFSLGLLHSLEQVKAFYKLEDSGKGEEHVDVRMDICQLKLVIPLESRILDHP
DRPQRLCVQASQSVFTNTRHCAHATAADLQGICHSFSHCPFFQLARGTPSFPRTSSSFPP
LPSAFLQHALEGDGAPEPLSKKKPPRSQDVWSLHLSGLALDFEGARRSPRGKALPFVEPL
AISLWICRPGAFHIKPHLPHFPPGCGSRLRASASCSNHIDSGLMTDRPGKHLKSRTVQDL
LDLGSNENDWPAQNGAGQDEDAGQMEMASIHVLAQALSPIRLRLNHYQYVALLRMKDTFS
RLGAELAQDTLGLRGEKVEPPTVSVGLLLESAEVVLLLPPATLEDTSPGSTESPSLTDSE
LSPAKGPLVAARLEDSGIGKAGSSEKEDGDGATAPPPVEEACEAVEALEDAGPSSPSPSL
NPPLHSRDNSSFSLEGELSSALTATKDVTKEAMTVTMDLTKEAVSITKDAFSILSREKMA
STMHKMLFVPPAREQPSRLEEAPSAPGRLRFLNTKLSQSQLSLDSTSLDASLPDDRFSID
SDSSDNFVILMDSESGSESLRPDSTPFLRADHGSRDSPALGTERDSSPDLSSSLSQSMEE
LCQDQVSVLLLRLSDVGCAVDMKGDDLLVALEARDVVPEQLGNVTMQQLLSGHALGVLWP
RRTPSSEPQETVMGAPVVQLQFVIGPAAAAQHGPLAETNGFLHLRVRGCTAELLTSSLAS
LGPFLEDELSADLLPMRVELDSTTVTLKDDGPLLYPTSPRPVPVIFSVDGLALERADDGI
FYLRAAGKESQEQASNTAASLNPDISTPDQLQRALDEAQAALETANADRERLLQEIRKYN
PGFDL
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggcagggatcatcaaaaagcagatcctcaagcacctgtctaggttcgcaaagaacctg
tcccccgacaagatcaacctgagcaccctgaagggggaggggcagctgtccaatctggag
ctggatgaggaggttctgcagaacatgctggacctacccacctggctggccgtgacccgg
gtctactgcaacaaagctgccatccggatacaatggacaaagctgaagaccagcccgatc
tgtctgctcctggacaaggtggaggtggagatgaggacgtgcgaggagccccgccccccc
aatggcccctcccccatcgccatcaccgcggggcagagtgagtatgggtttgcagagaag
gtggtggaaggcatgtccgtgctcattaactccatcaccatcaaggtccaggcccaggcc
ttccacgcctccttcgagctctggcagctccaggggaacagcctgaaccccaagtggcaa
cggagcgacctccgctacacccgcatcaccgaccccctgcgcggagaggtgctgacgttc
aaggagattaactggcagaccctacggattgaggctgacgccatggagagcggggagcag
gatctgggcagcacccccctgagactgatcactaaccagggccgcatccgaatcgccctg
aagcgccgggtgaaggactgcaacgtggttgcctcgaagctcctcttcatcctggatgac
ctgctgtgggtgctgaccgattcgcagctcaaagccatgatccgctatgccaagtccctg
agcgaggccatcgagaggtcagcccagcagaggaagagcatggcccctgaccccctgcag
agggtgcccacctcccctggcgccccacctccctggaacgagccggccccccacgctgcc
ccccccagcggggtccccaacagcctgagccaatactttgagcagcatgacgtcaaggag
tcctcttaccacaccctcatctccaggctggacctgcacatctgtgacgacagctcggac
agcgaggcaggtgggcagcagcctcgagtggccggaggagccatacagctgaccttccac
aagctgggcttcgactactaccccttccactggcccagtgacggctgccggcactgggag
cggtactgtggtgccatggagacgcgggcgcagtgggtgagcaagctgctgcaggacttc
cagcgccaagctgaggggcaggacaggcagacgggctcccctgtgcagggcaaggggacc
cccacccgcacccaggacggaggttccactccgaagtccagccctccggaccgggcccag
acccctcgccggacctctgcagccctgccaccccacggactgccctggaagaggctgcgg
tccagctgtttgctgatcagggtggatgacctggatatataccaggtgtccagcaagggt
cgccacagtaagaagccgcagaccctggtgtcctgcaacagaaagtccctgcagctccct
gacaacgtgtcagccattcacatccagttcacagagtactacttccctgaccactcccat
ctccccgtgccctgctccaacctgtatggccagcttaacgggctccagctgacccccgac
ccgctcagtctgctctggatcaatctcttctcactggggctcctgcacagcctggagcag
gtcaaggccttctacaagctggaggattctgggaagggggaggagcatgtcgacgtgcgc
atggacatctgtcagctcaagctggtgatcccgctggagtccagaatcctggaccaccct
gaccggccacagaggctctgtgtccaagcctcgcagtccgtgttcaccaacacgcggcac
tgtgcccacgccacggcagctgacctgcagggcatctgccactccttcagccactgcccc
ttcttccagctcgcgaggggaacccccagcttccccagaaccagcagcagcttccccccg
ctcccctccgccttcctgcagcacgccttggagggggatggagccccggagcctctgagc
aagaagaaacccccgcgctcccaggacgtgtggtccctgcacctctccgggctggctttg
gactttgaaggggcacgtcggagccccagaggaaaggccctgcccttcgtggagcccttg
gccatctccctctggatctgccgtccgggggccttccacatcaagccccacctacctcac
tttcctccaggctgtggctctagattgagggcgtctgcaagctgcagtaaccatatcgac
tccgggttaatgacggacaggcctgggaagcacctgaagtccagaacagtacaggatctg
ttggatttggggtctaacgagaatgactggccagcacagaacggggcagggcaagacgag
gacgcggggcaaatggagatggcctcaattcatgttttggcacaagccttgtcccctatc
aggctgcggctgaaccactatcagtacgtggctctcttgagaatgaaggacaccttttcc
aggctgggggctgagttagctcaggacacgctggggctaaggggcgagaaggtggagccc
cctactgttagtgtggggttactgctggagagtgctgaggtagtgttgctgctgcctcct
gcaacacttgaagatacttccccaggaagcacggagagccccagcctgactgattcagaa
ctgtccccagcaaaggggcccttggtcgctgctagactggaggacagtggcattgggaag
gcaggctcctcggagaaggaagacggcgacggcgccacagcaccccctcctgtcgaggag
gcctgcgaggctgtggaagccctggaagatgcaggcccttcctccccatccccgtctcta
aaccctccccttcattcccgagacaactcctccttcagcctggagggagagctgtcgagc
gcactcaccgccaccaaggacgtcaccaaagaggcgatgaccgtgaccatggacctgacc
aaagaggccgtgtccatcaccaaggacgccttcagcatcctgagccgggagaagatggcc
tctaccatgcacaagatgctgttcgtgcccccagccagagagcagccctctcgtctcgag
gaggccccctcagcccctgggaggctgcgtttcctcaacacgaagctctctcaatcccag
ctctccttggatagcacctcgctggatgccagccttcctgacgaccgcttctccatagac
agcgacagcagcgacaactttgtcatcctcatggactccgagtccggttcggagtccttg
cgcccggacagcaccccctttctgcgggcggatcacgggagccgtgacagtccagcactg
gggacggagagagactcgtccccagatctcagcagctccctgtcccagagcatggaggaa
ctctgccaggaccaggtgtctgtgctacttctccggctcagcgatgtgggctgcgcagtc
gatatgaagggggatgacctgctggtggcactagaggctcgggatgtggttcctgaacaa
ctgggcaacgtgaccatgcagcagctcctgagcggacacgccttgggagtactgtggccc
cgcaggaccccttcctcagagccgcaggagactgtgatgggggcccctgtggtgcagctg
caattcgtgattggtcccgcagctgcagcacagcacggccctctggctgaaaccaacggc
ttcctgcacctgcgggtgagaggctgcacggcggagctgctgacctcctcgctggccagc
ctcgggccgttcctggaggacgagctcagcgccgacctgctgcccatgagggtggaactg
gacagcaccacggtcactctcaaggatgacgggcctctgctgtaccccacctccccgagg
cctgtcccagtcatcttctctgtggatgggctggctctggagcgtgctgacgatggcatc
ttctacctgcgagctgcgggcaaagagtcacaagagcaggccagcaacacagctgcctca
ctgaatcctgacatctctaccccagaccagctccagagagccttggacgaggcacaggca
gctcttgaaacagccaacgcagaccgggagagactgctccaggagattaggaaatacaac
cctggctttgacctctga
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