Polyodon spathula (Mississippi paddlefish): 121300117
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Entry
121300117 CDS
T07273
Name
(RefSeq) protein RUFY3-like isoform X1
KO
K24776
RUN and FYVE domain-containing protein 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121300117
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121300117
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Arf GTPases and associated proteins
Other Arf associated proteins
121300117
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121300117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
FYVE
Trimer_CC
Nup49_C
DUF1664
CEBP_ZZ
DUF4164
Laminin_II
YjbH
Motif
Other DBs
NCBI-GeneID:
121300117
NCBI-ProteinID:
XP_041084470
LinkDB
All DBs
Position
2:72590823..72620225
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AA seq
673 aa
AA seq
DB search
MRSSCLKMAERGTASPGSVQVSECLELDDTTDRDRPPQKENNGYFSRGRLSPTSVIYFNK
TSSSEKVTVDSGRSVQFRSEDLPLPALQQYAISKTKNKNPKDPIAIERLNLMNMAKLSIK
GLIESALNLGRTLDSDYAPLQQFFVVMEHCLKHGLKTKKTFLGQSKSFWGPLELVEKLTP
EAGEITASVKDLPGLKTPIGRGRAWLRLALMQKKLSDYMKTLINRKDLLSEFYEPNALMM
EEEGAVIAGLLVGLNVIDANLCMKGEDLDSQVGVIDFSMYLKDGGHSSKSTEGDGQITAI
LDQKNYVEELNRHLSASVNNLQAKVDALEKSNTKLTEELAVANNRIITMQEDVERVKEES
CYLLESNPKVSKADGSADEHVLGDARKQLKEETQLRLDVEKELEVQIGMKQEMELSMKML
EKDICEKQDALVALRQQLDDLRSLNHEFSLKSQTSDSALKQKSEIISRLEDKASQLTATI
KQLELRLRKAEDQCQSAEEANRLFKQEFGDKIESLQLELEQTRKQRFHLEMELRKERERR
TIHHNNNSSGDKSPSSQIKTYKQHMAEIEKELQRVKDENVKLKTVLDDSLNSSKSLSQTE
DEQISPFIEPSICKLCEEEDSITRPKNSCKNCSEIFCESCLANELPLPSSIQPEHVCNAC
HTMLIQQYSASPS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcagctgcctgaagatggcggagcggggaacagcatccccaggaagcgttcaa
gtttctgaatgtttagagttagacgacacaacggacagagacagacccccacagaaagaa
aataacggatacttttctcgcggtcgcttgtctcctacttcggtcatctattttaataaa
acatcatcttcagagaaagtgactgttgactctggaagaagtgtccaatttcgtagcgaa
gacttgccacttcccgctttacagcaatatgccatttcaaaaaccaagaataaaaacccc
aaggatccaattgcaatcgaaaggctgaacctcatgaatatggctaagctgagcataaag
ggactgatcgagtctgcactgaatctggggcggacactggactctgactatgcgcccctt
caacagttctttgttgtgatggaacactgtcttaaacatgggttaaaaaccaagaaaaca
ttccttggacagagtaagtcgttttggggacctttggagttggtggaaaaattaacgcct
gaagcaggagaaataacagccagtgtaaaggacctgcctggactgaaaaccccgatcggc
agaggaagagcctggcttcgtctggcattgatgcagaagaaactctctgattatatgaag
actttgattaacagaaaggatcttcttagtgagttctatgaaccaaatgccttgatgatg
gaggaggaaggagctgtgattgctggactgttggtcgggctcaatgttattgatgcaaat
ctctgtatgaaaggagaagatctagattcgcaggttggggttatagatttctctatgtat
ttgaaggatggaggtcacagcagcaaaagcactgaaggggatggacaaattacagcgatt
ctggaccagaagaactatgttgaagaactcaacagacatctaagtgcttcagtgaacaac
cttcaggcgaaggttgatgctttagaaaaatcaaacacgaaactaacagaagagcttgca
gttgccaacaacaggatcataacaatgcaggaagacgtagagcgagtaaaagaagagagc
tgttatcttttggagtcaaaccccaaggtgtcaaaagctgatgggagtgcagatgaacat
gtacttggtgacgcacgaaaacagctcaaggaagaaactcagctccgtctggatgtagag
aaggagctggaagtgcagattggcatgaaacaggagatggagctctccatgaagatgctg
gagaaagacatctgtgaaaagcaggatgcattggtggcactccgacagcagctggatgac
ctcaggtcactcaatcatgagttttcactcaagtcacagacctctgattctgcactaaaa
cagaagagtgaaattatcagccgcttagaagacaaagcaagtcagttgacagcaaccatt
aaacaactggaattaagattacggaaagcagaggatcagtgtcagtcagctgaagaggcc
aacagactgttcaagcaggagttcggagacaagattgagagcctgcagctggagctggag
cagacgagaaagcagcgattccatttggagatggaattgagaaaggaaagagagcggagg
accattcatcacaacaataattcatcaggagataaaagcccttcctcacagataaaaact
tacaaacagcatatggccgagatagaaaaggagcttcagcgagttaaagatgaaaatgtt
aagctaaaaactgttttagatgacagtctcaactcaagcaagtcactatcacaaactgaa
gatgagcagatttcacccttcattgagccatcgatctgcaagctgtgtgaggaggaagat
tctataacaagacccaagaactcgtgtaaaaactgcagcgagatcttctgtgagagctgt
ttagcaaatgagttgcctctgccctcctccatccagccggagcatgtttgcaatgcatgc
cacacaatgctgatacagcagtactcagcaagcccatcctaa
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