Polyodon spathula (Mississippi paddlefish): 121300172
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Entry
121300172 CDS
T07273
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 13-like isoform X1
KO
K03039
26S proteasome regulatory subunit N9
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121300172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pspa03051
]
121300172
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
121300172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSD13_N
PCI
Rpn9_C
IFR3_antag
DUF4435
Motif
Other DBs
NCBI-GeneID:
121300172
NCBI-ProteinID:
XP_041084588
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Position
25:5234788..5245652
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AA seq
407 aa
AA seq
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MHVIPAELSLHHSEILLVYSSHRQSSFVMSCNDVVGYLRQQQERYGSAEGERWGRMETMY
NKRLWHQLTVELLDLVQSPAFATGDRIIKLYENFISDFEHRINPLSLVEMILLAVRQYSD
PESSLKLLEKTKEKVKSSDEAEILCRTAIAAINLKTGDHPAAKQTLDEVRVMLDKLQGVT
SLHSRFYHTSSSYYQVMGEHASYYREALRYLGCVELAELSVAAQQQKAFTLGLAALLGEG
IYNFGELLMHPILESLRSTDNRWLIDTLYAFNRGDVEAFYILKGCWDTQTDLAANESKLK
EKLQLLCLMEMVFTRPAHRRQITFQEISSRAKLPVNKVELLVMKALSNGLVKGSIDEVDS
KVHMTWVQPRVMDLKQVSGMKDRLEVWCEDIRKTSLLVENHAHEVLG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtaattccagctgaactttccctgcatcacagtgaaatattgttggtttattcc
agccatcgtcaatcgagtttcgtcatgtcatgcaatgacgtcgttggttacctgagacag
cagcaagagcggtacggcagcgctgaaggggagcggtggggccgcatggagaccatgtac
aacaagaggctgtggcatcagctgactgtggaattgctagatttagttcagagtccagct
tttgccactggagacaggattatcaagttgtatgaaaatttcatcagcgactttgaacac
agaatcaacccactgtctctggttgaaatgattttactggctgtccggcagtatagcgat
cctgaaagttctctgaagctgctggagaaaaccaaggagaaggttaaaagcagcgacgaa
gctgaaattctctgcagaactgctattgctgcaatcaatctgaaaactggtgatcatcca
gcagctaaacaaaccctggatgaagtgcgggtgatgctggacaagctgcagggggtgaca
tctcttcacagtcgcttctaccacacgtccagcagttactatcaggtcatgggggagcat
gcttcatactacagggaagcattgcgctatctgggctgcgttgaactggccgagctttct
gtggctgctcagcagcagaaggccttcacccttggcttggctgccctgctgggtgaaggg
atttacaattttggggaattgctgatgcaccccatcctggagtctctgcgaagcactgat
aaccgctggcttatcgacaccttgtacgctttcaacagaggcgacgtggaggctttctac
attctcaagggctgctgggacacccagactgacctagctgcgaatgagagtaaactgaag
gaaaagctacaactgctgtgtctcatggagatggtgtttactagaccagcccatcgcaga
cagataaccttccaggagatctcttctcgggccaagttgcccgtcaataaggtggaactg
cttgtgatgaaagccttgtcgaacggtctggttaaaggaagcattgatgaagttgacagc
aaagtccacatgacctgggtgcagcctagagttatggatctgaagcaggtttctggaatg
aaagatcgcctggaggtctggtgtgaagatatcaggaagacgtccttgcttgtggaaaac
cacgctcacgaagtccttggatag
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