Polyodon spathula (Mississippi paddlefish): 121300176
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Entry
121300176 CDS
T07273
Name
(RefSeq) electrogenic sodium bicarbonate cotransporter 1 isoform X1
KO
K13575
solute carrier family 4 (sodium bicarbonate cotransporter), member 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121300176
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC4: Bicarbonate transporter
121300176
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GFIT
Motif
Pfam:
HCO3_cotransp
Band_3_cyto
PTS_EIIA_2
Motif
Other DBs
NCBI-GeneID:
121300176
NCBI-ProteinID:
XP_041084601
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Position
2:72690810..72792719
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AA seq
1115 aa
AA seq
DB search
MSTDKSKMEDEAVLDRGASFLKHVCDEEVEGHHTIYIGVHVPKSYRRRRRHRRRVGHKDR
GEREKVTENASDKSDVENNDETSNSILRPLISPAAERIRFMLGEEDDSPAPPQLFTELDE
LLAVDGQEMEWKETARWIKFEEKVEEGGERWSKPHVATLTLHSLFELRTCIEKGTIMLDL
EAATLPQVVEMITDSQIENGLLKTELKDKVMYTLLRKHRHQTKKSNLRSLADIGKTVSSA
SRLFTNPDNARSQLENPVPCLTICTSDEDLEAWKSPSTGWLSSPTTTHRNLTSSSMNDIS
DKPEKDQLKNKFMKKLPRDAEASNVLVGEVDFLDSPFIAFVRLQQAVMLGALTEVPVPTR
FLFILLGPKGKAKSYHEIGRAIATLMSDEVFHDIAYKAKDRQDLLAGIDEFLDEVIVLPP
GEWDPAIRIEPPKSLPSSDKRKNMYAGGDNVQMNGDTPHDGGHGGGGHHVSNELKKTGRF
CGGLVLDVKRKIPFFASDFYDALSIQSLSAVLFIYLATVTNAITFGGLLGDATDNMQGVL
ESFLGTAVTGAVFCLFSGQPLIILSSTGPVLVFERLLFNFSKDNDFDYLEFRLWIGLWSA
FFCLLLVATDASFLVQYFTRFTEEGFSSLISFIFIYDAFKKMLKMADYYPINSDYKLDHV
TLYGCTCMPPTPDNSSGLFTETSDASSTWLFNNTGLLLNATWSSLSKKECIKYGGELIGN
SCKYVPDIALMSFILFFGTYTVSMGLKKFKTSQFFPTTVRKLISDFAIVLSILIFCGVDA
LVGVDTPKLIVPSEFKPTSPNRGWFVPPFGGNPWWVYLAAALPALLVTILIFMDQQITAV
IVNRKEHKLKKGAGYHLDLFWVAILIIVCSFMALPWYVAATVISIAHIDSLKMETETSAP
GEQPKFLGVREQRVTGTIVFLLTGVSVFMAPILKFIPMPVLYGVFLYMGVASLNNVQFMD
RLQLLLMPAKHQPDFIYLRHVPLRRIHLFTFIQVLCLALLWVLKSTVAAIIFPVMILALV
AVRKAMDYLFSQHDLSFLDDVIPEKDKKKKEDEKKKKKKKGSIDSDIDDSDYPYKENVPS
IKIPMDMMEQEPFLSDIKTSDREKTPSFLEQHTSC
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgataaaagcaagatggaggatgaagctgtgttggacagaggggcttccttt
cttaaacacgtctgcgatgaagaggtagaaggacaccacaccatctacattggcgtgcat
gtgcccaaaagctacaggaggcgaagacgccacaggaggagagtgggacacaaggataga
ggagagagagagaaagtgacggaaaatgcctctgacaagtcggatgtggaaaacaatgat
gagaccagcaacagcatcctcagaccactcatctcccctgcagctgagaggattcgcttc
atgcttggggaggaggatgacagcccggctccccctcagctctttacagaactggatgaa
ctgttggctgtagatggacaagaaatggaatggaaggaaacagcacggtggatcaagttt
gaagagaaggttgaagagggaggtgaaaggtggagtaagcctcatgtcgccacgttgacc
ttacacagtctgtttgagctgcggacctgtatagagaaggggaccataatgctggatttg
gaagctgctacacttcctcaggttgtggagatgatcactgacagtcagattgagaacggg
ctgctgaaaacagagctcaaggacaaagtgatgtacaccttactgcggaaacatcgccac
cagaccaagaaatccaatctacgctcactggctgacattggcaagactgtctctagtgca
agtaggctgtttaccaacccggataatgcacgtagtcagcttgaaaaccctgtgccttgc
ctaacaatttgcacctcggacgaggaccttgaagcctggaagagcccgagcacgggatgg
cttagtagcccaacaactacccatcgaaacctgacgtccagtagcatgaatgacatttct
gataaaccagaaaaagaccagctgaaaaacaagttcatgaagaagcttccccgggatgct
gaggcctccaatgtgctggtaggcgaggtggatttcctggacagccccttcattgctttt
gtgcggcttcagcaagcagtaatgttaggagccctgactgaagttcctgtaccgaccaga
tttctttttatcctgctgggacccaagggcaaagccaagtcttaccatgagatagggaga
gccattgccactctcatgtcggacgaggtgttccatgacattgcatacaaagccaaggac
aggcaggacctgttggctggaattgatgagtttctggatgaggtgattgttcttccacca
ggtgaatgggaccctgccattaggatagaacctccaaaatctcttccatcatcagacaag
agaaagaacatgtatgctggaggggataatgtgcagatgaatggggatacaccccatgat
gggggacatggaggtggaggacatcatgtgagcaatgagcttaaaaaaactggaaggttt
tgtgggggcctagttctagatgtcaagaggaaaatcccattttttgccagtgacttttat
gatgcattaagcatccagtccctgtctgctgtacttttcatatatttggcaacagtaacc
aatgccatcacttttggaggcctgctaggagatgctactgataatatgcagggtgtgttg
gagagcttcctaggcacagcagtcactggagctgtcttctgccttttctctggtcagccc
cttattatccttagcagcacaggtcctgtactggtctttgagaggctgctctttaatttc
agcaaggataatgactttgactacctagagttccgattatggataggcctgtggtcagcg
ttcttctgcctcctcctggttgctacggatgccagcttcctggtccagtatttcacccgg
ttcacagaggaaggcttttcctcgcttatcagcttcatttttatctatgatgcctttaaa
aagatgctcaagatggcagactactacccaatcaactcggactataagcttgatcatgta
accctttatggctgtacgtgtatgccgcctacaccagacaatagctcgggactgtttact
gagacatcagatgcgtcatctacttggcttttcaacaacactggtttgctcctaaatgca
acctggtcttccctgtcaaagaaagagtgtattaagtatggtggggagctaattggaaat
agctgcaagtatgttccagacatcgccctgatgtcctttatcctcttctttggcacctac
actgtctccatgggtctgaagaagttcaaaaccagccagtttttccccaccactgttagg
aagcttatcagtgactttgccattgttttgtccattctgattttctgtggagttgatgca
ctggttggggtggacacaccgaagcttattgtgccaagcgaattcaagccaacaagccca
aatagaggatggtttgtccctccattcggaggcaatccctggtgggtttacctggcagct
gccctccctgcactgctagtcaccatcctcatcttcatggaccaacagatcacagctgtc
attgtcaacaggaaagaacacaagctcaagaaaggtgctggctaccacctggatctcttc
tgggtagccattctgataatagtgtgttcgttcatggcactgccctggtacgttgctgct
actgtgatctcaattgcccacattgacagcttgaaaatggagacagaaacctcagcacct
ggagagcaacccaagtttttgggagttagggaacaaagagtgactgggaccattgtcttt
cttctgactggtgtgtctgtcttcatggctccaattctgaagttcatcccaatgccagtt
ctttatggagttttcctctacatgggtgttgcttcattaaataatgtgcagttcatggat
cgcttgcagctgcttttaatgccagccaaacatcagccggattttatctacctgcggcat
gtgccacttcgtcgaatccacttgtttactttcattcaggtgctctgtctggccctgcta
tgggttctcaagtcaaccgtggctgccattattttcccagtcatgatcctggccctcgtg
gctgtgcggaaggctatggactaccttttctcccagcatgacctcagcttcctggatgac
gtaattccagaaaaagacaagaagaagaaggaagatgaaaagaaaaagaagaagaagaaa
gggagcatagacagtgacattgatgattcggactatccgtacaaagagaatgttcccagc
attaaaatccccatggacatgatggagcaagagcccttcttaagtgatatcaaaacctca
gaccgagaaaaaacaccatctttccttgagcaacacacatcgtgctga
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