Polyodon spathula (Mississippi paddlefish): 121300256
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Entry
121300256 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: CAP-Gly domain-containing linker protein 1-like
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121300256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121300256
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121300256
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121300256
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
121300256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
DUF1664
Motif
Other DBs
NCBI-GeneID:
121300256
NCBI-ProteinID:
XP_041084691
LinkDB
All DBs
Position
25:19564969..19597066
Genome browser
AA seq
2081 aa
AA seq
DB search
MLWVGGTKAGVVRFLGDTDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPRYGLFAPVH
KVTKIGFPSTTPAKSKTPARKVLPTPSGLKRSPSSSSISSLSSVASSVGGKPSRTGLLTE
TSSRYARKISGTTALQEALKEKQQHIEQLLAERDVERGEVAKATSHVGEIEQELSLLRSG
HEQYVLEMESKMDQLRTLVEGADKDKVDLVNQLEEEKRKVEDLQFRVEEACITKGDLETQ
TKLEHAHIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLKSQVREVSEL
RHRLEASRGSGESDTAAPLLEELSSLRDQLASVSKDHQIELRALKEKLESSEKAREAELA
QLQTDHKKLSKENESLKSKLNQTRQENSDVIELWRSKLESASASHQQTMEELKVSFSKGA
SGQATELVELKSTVEKLKLDQKMKLENIRAKHVAENSMCFKEIEDLKTKLLEVTEEKEKL
VENLKTNLEDIEEQHLVEMEDALNKLHNAEEKVKELETFETKASEQTKAIETLKQEVRAA
EGKLKDLDLLKKAQEEGMVLIRSLEEKLEAAQALVVSQGSKANNFAKELEVKDEKLSSLE
QSLAALSQDKASLEQQLQTLKQHLDGTADDHKKVQQTMQASLEKLSEKDEQCSSLSNEVT
ALKTKLAEMERKMKSSEERAERLTKDKAKLESDITETMRSSGDSSAQLTKMNDELNQKER
KLEQLQTLLSEANEKAAQMEESLKQATCKAEQIQLEMSRNHQAEVKSMQQRLGEMEQIIE
KSTAHSRDLQVTHEKTLAEVTVQNKQFVDELKQKAQQSDQALASAQGRISEMEAMIAELK
QHKEQAASLTSELASAKAVVEQLTEDVRELNSEKNKFMLEGEKLRSERDLLVEKISDVEM
KYSDLEKKHQSLLSQSEELRGEKEGLTSDKKQFAQEVENLKAEIEKSAAETESLQTSKLE
LISKLEELQKSIEARKVDLLKYQQEIEHENTAKQNLLAENEEITKQKGHILEELKHTQEK
ASQEHKKLVEEREAVEGQKKVLQVAHSELKGQYGALETEREHLAQINSKLLLEKEKLEKD
KADLDSNLQKTVLKKDASAAKNEELQSQLNSVKKDLDKSLQDTAELLASKESLAKLLEEI
KTSREVKDSERVHLLQEKXLAAQRRVCAEKEQLLRQREETSEKLRLLGEEADGTQEKFRQ
EKEAFGREKEALHQKWVELENRFQALLEEKKALESKIECEKDSFMKGREDLMEKHEKELS
EKAGLALERDQLAVNVENIKGELEKSARENADQRAAKASLSSLLDQLQQGKEAVESAHVS
LQREKDELKAQLQKECIEKESLVKEKVDLEEKCQKLETAESAHVQGELTLERDAVQMKKD
FLMAQQMVLGDKVQSLQEKEDLAVQYEDLLLKKESILKEKEELESQQKHSADEKQSLLAE
KDGLVSKIKELQKEAEALSQENAKLHASGSSLLKDLDALRSSQEATDTDYTKLLQEKEDL
KAAHAKLLSKNQELLNKKQQLEQTHKDLCEEAATTAKDKEEISARLSAVSNEKEALIKGK
EDLKFQLKRSGDEKQDLVAEKDGLASKIEELKHGVEALAKEKAGLQASESSLLRKLEALC
SSQQAKEDLQAAHTKLLSENQELLKDKKQLELIYKNLCEQSAVTAQEKGEFASRLEEMKT
KRESLLKEKREGTMKLTELEALHKSAISEKLEAAKTADQALHSLDQITKEKNDAQASLEE
TKQTNHKLQQELDALKQQNSRFQEELNLSKEQRGSENKRIDDLRKEIEELKLEASRKSQH
LSALQEENMKLSAELGSSREEVSSHQKLEEERSALNNQLLEMKKSLPNNTLRESLLKKGS
NEEKASLEKSIQKTSALISEKDKELEKLRNEITVLQGENAKIKTMQSAVQSLETDKAKLQ
EKVQNLEKKLAENKNKRENNTGSSGDTDLEQLREDKESAESQLDFLNSVIIDLQRKNEEL
KSKLQTMAEASLNGNTASELDNYDSFSETQEKKKKPAPRLFCDICDCFDLHDTEDCPTQA
QMPGTPPHTAYHGSRGDERPYCDICEVFGHLTNSCNDDETF
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggttggaggcacgaaggctggagtagtgcgattcctaggagatacagacttt
gcgaagggagagtggtgcggagtcgagcttgatgaacctttgggaaagaacgatggggcg
gtggctggaaccaggtacttccagtgccaacccagatatgggttatttgcaccagtccat
aaagtaacaaagattggatttccatctacaacaccagccaagtcaaaaacaccagcacgg
aaagtgctacctaccccgtcaggcctgaaacgaagccccagctcctcctccatcagctcc
ctcagctcagttgcttcttcagtgggaggcaaacccagccgcactggcctgctcacagag
acctcatcccgctatgcaaggaagatctcgggcaccacagccctgcaggaggcgctgaag
gagaagcagcagcacatcgagcagctcctggccgagcgggatgtggagagaggcgaggtc
gccaaggcaaccagccacgtgggagagatcgagcaggagctctcgttgctccgatcaggc
catgaacagtatgtgttggaaatggagtcgaagatggaccagctgcgcacgctggtggag
ggggcagacaaggataaagtggatctggtcaaccagctggaagaggagaagaggaaggta
gaggacctgcagttccgggtggaggaggcttgcattaccaaaggagatctggagacgcag
accaaactggagcatgcccacattaaggagcttgaacagagcctgctctttgaaaagacc
aaagctgacaaactccagagagagttagaagacactagggtagccactgtatctgagaag
tcccgcattatggagctagagagagatctgaagtcccaagtgagagaggtgtctgagctc
cgccacagactggaggcttccagggggtcaggcgagtccgacactgctgctccgctgctc
gaggaactgagctctttgagagatcagctcgcctctgtaagcaaagatcaccaaatcgaa
ctccgtgccttaaaagaaaaacttgaaagttcagagaaggcgcgtgaagcggagctggcc
cagctccagactgaccacaagaaactctccaaagagaatgaatccttgaagagcaaacta
aaccagaccagacaggagaactcggacgtcattgaactgtggcgttcgaagctggagtcc
gccagcgcttcacaccagcaaaccatggaagagctcaaagtgtccttcagcaaaggggcc
agcgggcaggccacagagctcgttgagctgaagagcactgtggagaagctgaagctggac
cagaaaatgaaacttgaaaatatcagagcgaagcatgtcgcagagaactccatgtgcttc
aaagagatcgaggacctgaagaccaagctgctggaggtcaccgaggagaaggagaagctg
gtggagaacctcaagaccaatctggaggacatagaggagcagcacctggtggagatggaa
gacgccctgaacaagctgcacaacgcggaagagaaggtaaaagagctggagacgtttgag
acaaaggccagtgagcaaacaaaggccattgagaccctgaagcaggaggtgagggccgcg
gagggcaagctgaaggatctggacttgctgaagaaagcacaggaggaaggtatggtgttg
atcaggagcctggaggaaaagctggaggcggctcaagccttggtggtttctcagggcagc
aaggctaataactttgccaaagagcttgaggtaaaagatgagaaactttccagtctcgag
cagagcctggctgcattgagccaggacaaggcatctttggaacagcagctgcagactttg
aaacagcaccttgatggcacagcagacgatcacaagaaagtccaacagactatgcaagca
tcacttgaaaaactcagtgaaaaagatgagcagtgctcgtccctgtccaacgaggtgacg
gccttgaaaactaaacttgcagaaatggaaaggaaaatgaagtccagcgaggagagagca
gaacggctgaccaaagacaaggcgaaactggagagcgacatcaccgaaacgatgaggtca
tcgggggacagctccgcccagctcacgaaaatgaacgacgagcttaatcagaaggaaaga
aagttagagcagctgcagaccctgctttcagaggccaatgaaaaggcagcccagatggaa
gagagcctcaaacaggcgacgtgcaaagcagagcagatccagctggagatgagcaggaat
caccaggcagaggtgaaatccatgcagcagagactgggagagatggaacagataatcgag
aagagcactgcccacagcagggacttgcaggtcactcatgagaagacccttgcagaagtg
actgtgcagaacaagcagtttgtggacgagctaaagcagaaggcacagcagagtgatcaa
gcgctggcgagcgcgcaggggaggatcagcgaaatggaggccatgatcgccgagctcaaa
cagcacaaggagcaagctgcgtctctaacatctgagctagcatcagccaaagctgtggtt
gagcaattaacagaggatgtgagagagttgaactccgaaaaaaacaagttcatgctagaa
ggagagaagctcaggtctgaaagagacttgctcgtggagaaaatatcggatgtggaaatg
aaatattccgacctggaaaagaagcaccagagcctgctctcacaaagcgaagagctgcga
ggggaaaaggaaggactgacatcagataaaaagcagtttgctcaggaggtagagaatctg
aaagcagagattgaaaagtcagctgcggagacagagagccttcagacctccaagctggaa
ttgataagcaaactggaggaacttcagaaatccatcgaagccagaaaggttgatcttcta
aaatatcaacaggagattgagcatgagaacacggctaagcagaatctgttggcagaaaat
gaggagatcaccaaacagaagggtcacatccttgaggagctgaaacacactcaagaaaaa
gcatcacaagagcacaagaagcttgtggaggaaagggaagcagtggaaggccagaagaag
gtgctgcaggttgcacattctgagcttaaaggtcaatacggcgctttagaaacagagagg
gaacatctggctcaaataaactcaaagctgctcttagaaaaagagaaactagagaaagac
aaagcagaccttgactcaaatctgcagaagactgtcttgaagaaagacgcctcagcagcc
aaaaatgaagagcttcagagccaactgaacagcgtcaagaaggacctggacaagtcgctg
caagatactgctgaactcctagcctccaaagaaagcctggctaaactcctggaagaaatt
aagaccagtagggaggtgaaggattccgagcgggttcatctgcttcaggaaaaanngctt
gctgctcagaggagggtgtgtgctgagaaggagcagcttctgagacagagggaggagact
tcagagaagctccgcctgttgggtgaggaggcagatggcactcaagagaagttccggcag
gagaaagaagccttcggtagagagaaagaggctctccatcaaaagtgggttgaactcgag
aacaggttccaggcactgctggaagaaaagaaagccctggaatccaaaattgagtgtgaa
aaggattccttcatgaagggaagagaagatctgatggagaagcatgagaaggagctctcg
gagaaggcaggcttggctcttgagagggaccagcttgcagtcaatgttgagaacataaaa
ggggaacttgaaaaatcagcccgagaaaacgctgaccagcgagcggcgaaagccagcctg
tcttccctcttggaccagcttcagcaaggtaaggaggctgttgaatcggcacatgtttcc
ctccagcgggaaaaagatgaactaaaagcacagcttcagaaggagtgcatagaaaaagaa
tcccttgtgaaagagaaggtggacctggaagagaagtgtcagaaactagaaacagcagag
tcagctcacgtgcagggtgagctgactctcgaaagggatgctgttcaaatgaaaaaggat
ttcctcatggcccagcagatggtgcttggggacaaagtgcagtcgttgcaggagaaagag
gatcttgctgttcagtatgaagacctgctgttgaagaaagagtccattcttaaagagaag
gaagaactggagtcccagcagaagcacagtgctgatgagaaacaaagtctactggctgag
aaggatgggctggtgtccaagattaaggagctgcagaaagaggctgaagctttgtctcaa
gagaatgctaagttgcatgcttcagggtccagcctcttgaaagacttggatgccctacgc
agcagccaagaggcgacggacactgattacaccaagctgctgcaggagaaggaagacctg
aaggctgctcatgcaaaactgctctccaagaatcaggagcttctcaacaagaagcagcaa
ttggagcagacgcacaaggacttgtgtgaagaagccgccactaccgccaaggacaaagaa
gaaatttcagccaggctgagtgccgtgagcaatgagaaagaagccttgattaaagggaaa
gaagacttgaagtttcagctaaagcgcagtggggatgagaaacaagaccttgtggctgag
aaggacggtctggcttccaagattgaggagctgaagcatggagtggaggctttggctaag
gagaaggctgggcttcaggcctcggagtccagcctccttaggaagctggaagcactctgt
agcagccagcaggcgaaagaagatcttcaggcagctcatacgaaactgctctccgaaaac
caggagcttctcaaggacaagaaacaactggagctgatttacaagaacttgtgcgagcaa
tctgctgtcactgcacaggagaaaggagagtttgcaagcaggctggaagaaatgaagacc
aagagagagtccctgctcaaagagaagagggaagggaccatgaaattaacagaacttgag
gctcttcacaaaagtgctatttcagaaaagcttgaggctgcaaaaacagctgatcaggct
ctgcactccctggaccagataaccaaggagaagaacgacgcccaggcctcgctggaggag
accaagcaaacaaaccacaaactgcagcaagagcttgatgcattaaaacaacagaactca
aggtttcaagaggagcttaatctgtctaaagagcaacgcggatcagagaacaagaggata
gacgacctccgcaaggaaatcgaggagctgaagctggaagcatctcggaagtctcagcat
ctctcagctctgcaagaggagaacatgaaactgtctgcggagctgggctcgagccgagag
gaagtcagcagccatcagaagcttgaagaagagcggtctgcccttaataatcagctgcta
gaaatgaaaaagagcttgcccaataatactttaagagagtctttattaaagaaaggatcc
aatgaggaaaaggcttccttagagaaatccatccaaaaaaccagtgccttgatctcagaa
aaggacaaagaattggagaagctcagaaatgagattacagtgttgcaaggagagaatgcc
aagattaagacaatgcagtctgcagtgcagtccctggaaacagacaaagccaaactgcaa
gagaaggtgcagaatctggagaagaaactcgctgaaaacaagaacaagagagagaacaac
accggctcatcgggagacacggatcttgaacagctaagagaagacaaggagtctgcagag
agccaacttgacttcctcaattcagtgattatagatctgcagaggaaaaacgaagagctg
aagagcaaactgcagacaatggcagaagcgtctctcaatggcaatactgccagtgaactg
gacaactacgacagtttcagtgaaacccaggagaagaagaagaaacctgcccctcgtctc
ttctgtgatatctgcgattgcttcgacctccacgacacggaggactgccccacgcaggcg
cagatgccaggaactccgccgcacaccgcttaccatggcagccggggggatgagcgtccg
tactgtgatatctgcgaggtgttcggacacttgaccaacagctgcaacgacgacgagacc
ttttag
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integrated database retrieval system
