Polyodon spathula (Mississippi paddlefish): 121300284
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Entry
121300284 CDS
T07273
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121300284
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121300284
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121300284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Torus
zf-CCCH
zf-CCCH_4
zf_CCCH_4
zf-RING_2
zf-CCCH_2
zf-CCCH_3
zf-C3HC4
zf-UDP
zf-C3HC4_4
zf-RING_5
zf-rbx1
zf-RING_UBOX
IBR_1
Motif
Other DBs
NCBI-GeneID:
121300284
NCBI-ProteinID:
XP_041084724
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All DBs
Position
25:5460119..5465464
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AA seq
443 aa
AA seq
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MERAMERAMERASAGTRTGNKRVPSADRIPCRHFIHGTCRLGPSCPFSHELPVWKSSQIC
KYFQKGCCWFGDRCRYQHVLQADGGYSGSRRGSAPALLPPWGGSAFQNRRGSEPSVQQAH
WGYAGSRRGSAPAVTSLASLQRNFARLSTEFEENEEDHEAEFRPMLQHAGPLTAHAAQQT
PNTPSPCRTGSMSSSASAPCLQIGAINVAEHASKLASHERHGLPKASSSQQEAAPSSSAD
SRGAGAGASASEAYERSKDVMCGICMDKVYEKPAPEDRRFGILPNCSHPFCLGCIVTWRK
TKDFQDDVIKSCPQCRVKSTFYIPNKYWVSDPAQKHTLVAKFKERTSKIKCKFYMRHGCC
PFKSECIYLHELPQGHRHLRRRRSAALPRRRSSTEDSDSEGFHIMQYAVALALLHDNGDV
PDDHFSHRHFFEIFLDDSFFDSD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagagagcaatggagagagcaatggagagagcaagcgctggcaccagaaccggcaac
aagcgggttcccagtgcagacaggattccctgcaggcacttcatccatgggacatgtaga
ctgggcccgagctgccccttctctcacgagttgccggtgtggaaatcctcccagatctgc
aagtacttccagaaaggctgctgctggttcggagaccgctgcaggtaccagcatgtcctc
caggccgacggtggctactcgggtagcagacggggctctgcccctgccctcctgcccccc
tggggtggcagtgcgttccagaaccgccgcggctcggagccgtctgtccagcaggcccac
tggggttacgccgggagtcgacgggggtccgcaccggccgttacgagcctggccagcctc
cagaggaactttgcgcgtctgagcaccgagtttgaagagaatgaggaagatcacgaggct
gagttcagaccgatgctgcaacatgccgggccattaactgcacacgcagcacaacagact
cccaacaccccctctccgtgccggacaggttccatgtccagctctgcctcggccccttgc
ctccagattggtgcaataaatgtcgcagaacatgccagcaaactagcttctcatgagagg
cacggtctacccaaggcatcttccagccaacaagaggcagctccgagcagttctgcagac
tctcggggcgctggtgcgggggcgtctgcctcggaagcctatgagaggagtaaggatgtg
atgtgtgggatctgcatggacaaggtgtatgagaagccagccccagaggatcgccgcttc
ggaatcctgcccaactgcagccaccccttctgtttgggctgcattgtcacctggaggaaa
accaaggacttccaggacgacgtcatcaagtcgtgccctcagtgcagagtgaagtcaact
ttctacattccaaacaaatactgggttagtgaccctgcccagaagcacaccctggttgcc
aaatttaaagaaaggaccagcaaaataaagtgcaagttttacatgcggcatggatgctgt
cccttcaaatcggagtgcatctatctgcacgagttgcctcaagggcacagacacctgaga
aggaggcgatcggcagctttaccccgtcgccgcagctccacagaagactctgacagtgag
ggtttccacatcatgcagtatgcggtcgccctggccttgctgcacgacaacggcgacgtg
ccggacgaccacttcagccaccgccacttcttcgagatcttcctggacgactcctttttc
gactcggactga
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