Polyodon spathula (Mississippi paddlefish): 121300341
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Entry
121300341 CDS
T07273
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121300341
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspa01007
]
121300341
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121300341
Enzymes [BR:
pspa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
121300341
Amino acid related enzymes [BR:
pspa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
121300341
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121300341
Prokaryotic type
121300341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
121300341
NCBI-ProteinID:
XP_041084834
LinkDB
All DBs
Position
2:complement(73935005..73951975)
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AA seq
724 aa
AA seq
DB search
MESDKVTEQLEKMKIEAEKKGCAGGDKCKDGSKKKTKTGGDGGSRTELSPWPQYISERLE
LYNKLKQEHDTLMGERAEKESKPIIVTLPDGKQIDAESWKTTPYKLACGISQGLADNTVI
SKVNNILWDLDRPLEENCTLQLLKFDDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPI
ENGFYYDMFLDNEGVSSNDFPALENLCKKIMKEKQPFERLEIKKETLLEMFKYNQFKCRI
LNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKAIKVHKNSSTYWEGKADMETLQRIYG
ISFPDSKMLKDWEKFQEEAKNRDHRKLGKEQELFFFHDLSPGSCFFLPKGAFIYNALIEF
IRSEYQKRGFQEVVTPNIYNSKLWQTSGHWQHYSENMFSFEVEKEIFALKPMNCPGHCLM
FDNRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMEQIEDEIKGC
LNFLRAVYDVFGFTFKLNLSTRPEKFLGDTAVWDQAEKQLESSLNEFGEKWVLNPGDGAF
YGPKIDIEIKDAIGRYHQCATIQLDFQLPIRFNLTYVSNDGDDKKRPVIIHRAILGSVER
MIAILTESYGGKWPLWLSPSQVMVIPVGPTCEDYAKAVRQQFHDGHLVTDVDLDPGCTLN
KKIRNAQLAQYNFILVVGEKEKSSNTVNVRTRDNKVHGERTVSECIERLQQLKVSRTRNA
EEDF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagataaagtaacagagcagctggaaaaaatgaaaatagaagcagagaaaaag
ggctgtgctggaggagacaagtgcaaagatggcagtaagaagaaaaccaagacaggggga
gatggggggagtcgtactgagttaagcccatggcctcagtatattagtgaacgattggag
ctctacaataaactgaaacaagaacatgataccctgatgggcgagagagcagaaaaagag
agcaaacctatcatagttaccttgcccgatgggaagcagattgatgcagaatcctggaaa
accacaccttacaagcttgcatgtggaatcagccagggcttggctgataacactgtgatt
tcaaaagtgaacaacatattatgggaccttgatcggccgctggaagaaaactgtacccta
cagctgctcaagtttgatgatgaagaggctcaagctgtttactggcattcaagtgcccac
atcatgggagaagcaatggagagggtttatggcggctgtctatgctatggcccacccatc
gaaaatggcttttattatgacatgttccttgacaacgaaggtgtgtctagtaatgatttc
ccagcccttgagaacctgtgcaagaagataatgaaggagaagcagccatttgagagactt
gagatcaagaaggagaccctgcttgagatgttcaagtataaccaatttaagtgcaggatt
ttgaatgagaaggtgaacaccccaacaactactgtatacaggtgcggcccattgatagat
ctttgtagaggacctcatgtcagacacactgggaaaataaaggccattaaggttcataag
aactcttccacttactgggaaggaaaggctgatatggaaaccctgcagaggatttatggg
atctcctttcctgactccaagatgttgaaggactgggaaaagtttcaggaagaggcaaag
aacagagatcatcgcaaacttggcaaggaacaagagctatttttcttccatgacctgagc
cctgggagctgtttcttcctgccgaaaggagcctttatatacaatgctctaattgaattt
attaggagtgagtatcagaagagaggcttccaggaggtggtgacaccaaacatttacaac
agcaagctgtggcagacctccgggcattggcaacactacagcgagaacatgttctccttt
gaggtggagaaagagatctttgccctcaagcctatgaactgccccggccactgcctgatg
tttgacaatcgcccccgctcctggagggagctccccctccgcctggctgacttcggggtg
cttcaccgcaatgagctgtcgggggcgctgacggggctaactcgtgtacgccgcttccag
caagacgatgcacacatattctgtacaatggagcagatcgaagacgagattaagggctgt
ctgaatttcctgcgagctgtctatgatgtgtttggattcacattcaaactcaacctatcc
actcgccctgagaagttccttggtgacactgcagtatgggaccaagctgagaagcaactt
gaaagcagcctgaatgaatttggagagaaatgggtgcttaacccaggtgatggagcattt
tatggaccaaagattgatattgaaatcaaggatgccattggacgataccaccagtgtgct
acaatccagttggatttccagcttccaattagatttaatcttacctatgtgagcaatgat
ggagatgacaagaagaggcctgtgattatccaccgtgccatcttggggtctgtggagagg
atgatcgccatcttgactgaaagctatgggggcaaatggcctctctggctatctccgagt
caggtgatggtgataccagttggacccacatgtgaagactacgcaaaagcggtgcgtcaa
cagtttcacgatggtcacctggtgactgatgttgacttggatccaggctgcactcttaat
aagaagatacgaaatgcacagctggcacagtataacttcattctggttgttggtgagaag
gagaagagcagcaacaccgtgaatgtacgtaccagagacaataaggttcacggcgagcgc
actgtctctgaatgcatcgagaggctccagcagctcaaggtctcccgtaccagaaatgca
gaagaggacttctaa
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