Polyodon spathula (Mississippi paddlefish): 121300361
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Entry
121300361 CDS
T07273
Name
(RefSeq) interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121300361
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121300361
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
121300361
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121300361
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
121300361
NCBI-ProteinID:
XP_041084863
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All DBs
Position
25:complement(2908133..2915117)
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AA seq
450 aa
AA seq
DB search
MAVHPRRVRLKPWLVTQVDSGLYPGLMWLNREAKRFQIPWKHATRHSPQHEEENTIFKAW
ALETGKYQEGIDEPDPAKWKAQLRCALNKSREFKLIYDGTKEVPMNPLKIYDVCEIPQVI
GNPGSTGSVPWEENDADPEEEEDESFPYLHVKGSVSPIDPASVQSCPPVEVWPKEEPVDM
EVPPTPLPEDMFSSPEMWISSLPMTDLEVQFQFRGKEACPPLIVSNPQGCRLFYGDLGPM
VNQEELFGPVSLEQLRFPSAEHIANEKQRLFTGRLLDVMDRGLILEISGHDIYAVRLCQC
KVYWSSPCAPNPNAPNLIERQKKVKLFCLESFLSSVIAQQKGQSDKPAQFEIHLCFGEEW
PDGRPKERKLIMVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAHLKQL
YRLLQTHQGHDGWQIPPSANMHIPPALSAQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccacccgcgccgagtccggctcaagccctggctggtcacccaggtggacagc
ggtctgtacccgggactcatgtggctgaacagagaggccaagagattccagataccatgg
aaacacgccaccagacacagcccccagcacgaggaggagaacaccatcttcaaggcttgg
gctctggagactgggaagtaccaggaagggatcgatgaaccagacccggccaagtggaaa
gctcagctgcgctgtgccttgaacaagagccgggagttcaaactcatctacgacggcacc
aaggaggttcccatgaacccgctgaagatctacgacgtgtgtgaaatcccgcaggtcatc
ggaaacccaggttccacgggctccgttccctgggaggagaatgatgcagatccggaggaa
gaggaggatgaatcgtttccctacctgcatgtcaagggctctgtgtccccgatagaccct
gccagtgtccagagctgtccccctgtggaggtctggccgaaggaggagccggtggatatg
gaggtgcccccgaccccccttcctgaggacatgttcagctctcctgaaatgtggatcagc
tccttgcctatgacggatctggaggtgcagttccagttccgcggtaaggaggcgtgcccc
ccgctgatcgtgagcaacccccagggctgcaggctgttctacggggacctggggcccatg
gtgaaccaggaggagctgttcgggccggtcagcctggaacagctgcgtttcccgtccgcc
gaacacatcgccaacgagaagcagcgactcttcaccggccgcttgctggacgtcatggac
cgcggcctcatcctggagatcagcgggcatgatatctacgccgtgcggctctgccagtgc
aaggtgtactggtccagcccctgcgcccccaaccccaacgcgcccaacctcatcgagagg
cagaagaaggtcaagctcttctgtctcgagtccttcctcagcagtgtgattgcccagcag
aagggacagtcggataagccagcccagtttgaaatacacctctgctttggggaggagtgg
cctgatgggagacccaaggagaggaaactcatcatggtccaggtgatcccggtagtggcc
cgcatgatctacgagatgttctcgggggatttcacacgctccttcgacagtggcagcgtg
cgtctgcagatctccacgcccgacatcaaggacaacatcgtggctcacctcaagcagctc
taccgcctcctgcagacccaccagggacacgatggctggcagatcccacccagcgccaac
atgcacatcccgcccgcgctctccgcccagtaa
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