KEGG   Polyodon spathula (Mississippi paddlefish): 121300369
Entry
121300369         CDS       T07273                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121300369
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pspa03041]
    121300369
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121300369
Spliceosome [BR:pspa03041]
 Complex B
  Other components
   Prp19 complex
    121300369
 Complex C
   Prp19-CDC5 complex
    121300369
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    121300369
SSDB
Motif
Pfam: BCAS2
Other DBs
NCBI-GeneID: 121300369
NCBI-ProteinID: XP_041084879
LinkDB
Position
25:complement(1907886..1911392)
AA seq 225 aa
MAGTSSVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYLPTPDFST
FETEIMRNEFERLAARQPMELLGMKRYELPAPSSGQKNDITAWQDCVNNSMAQLEHQAVR
IENLELMSQYGSNSWKLYNENLMHMIELSQKELQRVRKEIQDLNWQRKNDQMKGGAKLRE
LESNWVSLVSKNYEIERAIVQLENELCQLNQQHGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggcaccagctcggttgctggagaggtgtttgtggacgctttgccttattttgat
cagggatatgacgctgctggcgtgcgagaggcggcggccgcactcgtggaagaggagacg
cggcgatacagacccacgaagaattacctcagttacctgcccacgcctgacttctctacc
ttcgagacagaaatcatgcgcaatgagtttgagaggctagcggccaggcagcctatggaa
ctcctgggcatgaagaggtatgaattgccggccccctcgtcgggacagaagaatgacatc
acggcgtggcaggactgcgtgaacaactcgatggcacagcttgagcaccaggcggtgcgc
attgagaacctggaactcatgtctcagtacggcagcaacagctggaagctgtacaacgaa
aacctgatgcacatgatcgagctgtcgcagaaggagctacagagggtcaggaaggagatt
caagacctgaactggcagaggaaaaatgaccagatgaaaggtggagccaaactacgagag
ctggagtccaactgggtgtcgctggtcagcaagaactacgagatcgagagagccatcgtg
cagctggagaacgagctctgccagctgaaccagcagcacggggatgagaacaaggagaac
atccggcaggacttctga

DBGET integrated database retrieval system