Polyodon spathula (Mississippi paddlefish): 121300447
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Entry
121300447 CDS
T07273
Name
(RefSeq) protein sidekick-1-like
KO
K16353
protein sidekick
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121300447
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
Sidekick 1/2
121300447
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
I-set
Ig_3
ig
Ig_2
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
121300447
NCBI-ProteinID:
XP_041084956
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All DBs
Position
26:complement(7498591..7581298)
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AA seq
1738 aa
AA seq
DB search
MAPTFTQLPSDITVTDGTTAVFTCEVSGAPKPAIAWKKSNQILASGSVQIPRFTLLETGG
LQVRPVYLQDAGNYSCYASNSEGAVNATISLTVWNRTFISHPPEGRRVIKGTMAVLECGA
TYDPRVSVRFVWKKDGVPLNNDRSSRLSIKDGSLQISQTWSGDIGDYTCEVLSQGGNDSK
GARLEVIELPHSPRNLQASLNVSDSRTVGLSWVPPFDGNSPLLYYVVELSENNSPWKVNL
PKVQADTSGAVVTGLTPARTYQFRVCAVNQVGKGQYSTETNRLMLPEEPPSAPPKNIVAS
GRTNQSIMVQWQPPPEPELNGVLRGYMLRYRLAGLPGEYQLKNITSPEINYCLVRDLIIW
TQYEIQVAAYTGAGLGVFSHPVTEYTLQGVPTAPPQNVETKALTSTTVEFSWNPPPQQFI
NGINQGYKLLAWPEDSPDTVTIVTITPDFHGTRILGYITGLKKFTWYLTSVLCFTTPGDG
PRSSQQLVQTFEDKPGAVGHLSFTEILDMSLRVSWQEPQEKNGIITGYHVTWEVYGRNAT
RVTRTLPNSTLEYKVTGLTSLTTYTIEVAAMTAAGMGVVTSSAISSGVPPELPGAPSNLI
ISNISPRSATLKFRAGDDGKTSISKWIVEGQVGGIGDDEEWRILYEKANDPDPQVLEIPD
LTPFTHYRFRMRQVNIVGSSPASQPSRVIQTLQAPPDVSPSSVTVRTASETSLWLRWVPL
PDSEYNGNPETVGYRISVWRADLQGEPRTQLVSERLEREITLEGLKEWTEYLLRIQAFNS
IGPGPWSEVVRGRTRESVPSGAPQNVTTEAVSSTSILVTWVPVPEHERNGYILGFKVLYK
EKDSGSDPQIHVVKGNLTQSVLLRNLRKYVLYEIQVLAFTRIGDGVPSSPPVLERSKDDV
PGPPVRLVFPEVRLTSVRVVWQPPVDPNGIIMGYQIAYRLAAGDPNEFTTVEVGSNVRQL
TVTSLKSESAYVFRISAKTQQGWGAPEQAAVITTERRDRPEPPKNLSITQSEVWSRGLLL
RWVPGGDGSSPVRYFTVLTKELPDGEWQTHSSAISHNSTSWHVDRLKPFTSYKLRMMATN
DIGDSEYSAETDTITTLQDVPDEPPVILAVTPHTTSSVLVQWQRPKEESLNGVLVGYRIY
YRELQYESGQPKSKTTANPSALQVDRTAKSTFKTVNSALLTAFELTQLNKYKRYEIVMTA
YNIIGESPTSAPVEVFVGEAAPSMAPQNIQVNPLTASQLEIQWDPPPVETQNGNIQGYKI
YYWETGNYNETEKLKILFLPEATMRLKNLTSYTSYSVKISAFNAAGDGPQSEPRWGRTHQ
AAPSAPSYMTFSEVTTTTLNVSWGFPVWPNGVLEGYRVVYEPLAPIHGVSKVVTVEIKGN
WQRWLKVRDLTKRVTYSFRVQAKTIAYGPELEANITAGPSVGSPGSPLEPSVTKSASTLT
LHWSAGDPGTEPVTGYAIEARPSDEGLWDTFVKHLPPSTRSHTVSLDRLRQGVSYEFRVI
AINKFGYGEPSVPSAVLSAQSENPFYEEWWFLIVMALCGLILILFIVFGLVLHGQSKKYK
SCNLGKNISTVEESVTLDNGGFTSLELNSRHLNVKSSFLKKNGTRSPPRPSPGGLHYSDE
DICNNYNGAVLTESTTLTEKPTEMSESETTDSDYEDEQPKHSFVNHYMSDPTYYNSWKRQ
QKGMKQSSTYAYEECASGDAESYFQSVVTTHSSGGVYTPAGQPAPGSRTPITGFSSFV
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggcacctacatttactcagctgccgtcagacatcacagtgacagatggaacaacggct
gtctttacctgcgaggtgtcaggagctccaaaacctgccattgcctggaagaaaagcaat
cagattctggcaagtggttcagtccagattcctcgattcactcttctggagacgggaggg
ttgcaggttcggccagtttacctgcaagacgctgggaattacagctgttacgccagcaac
tcagagggagctgtcaacgctaccatctcgctgactgtgtggaaccgtacttttatatcc
catccacctgagggccgacgtgtaatcaagggaacgatggctgtgctggagtgtggagcc
acttacgaccccagagtctctgtcaggtttgtctggaagaaggatggtgtcccactcaac
aacgacaggagttctcggctcagcatcaaggatggctctcttcagatcagccagacctgg
tcaggtgatatcggagactacacctgtgaggtcctttctcaagggggcaatgactctaaa
ggtgcccgactagaagttattgaactcccacactcccctcggaaccttcaggccagcttg
aacgtctctgacagtcgcaccgtgggtctctcctgggtgcctccctttgatggaaacagc
cccctcctctactatgtggttgagctgtctgaaaacaactccccatggaaggtgaatttg
cccaaagtgcaggctgatacctcaggggcagttgtgacagggttaaccccagcccgtacc
taccaattccgggtctgtgctgtcaatcaggtgggaaaggggcagtacagcacagagacc
aataggttgatgctgccagaagaacctccaagcgccccaccaaagaacattgttgccagt
gggcgtaccaaccaatccataatggtccagtggcagccgcctccagaaccagaactcaat
ggggtgctcagaggatacatgcttaggtatcggcttgctggccttcccggcgagtaccag
ctgaagaatatcaccagcccagagattaactactgcctggtgagggacctcatcatctgg
acgcagtatgaaatccaggtggctgcttacactggagccgggctaggagtgttcagccat
cctgtgacagaatacacacttcagggagtgccaacagctccaccacaaaatgttgagaca
aaggccctgacatccaccacagtcgagttctcctggaatcctcctccccagcaattcatt
aacggcatcaatcagggttacaaactcctagcttggccagaagattcgcctgacactgtt
accatagtaactataaccccagatttccacggaacccgcattcttggatacatcaccggg
ctgaagaagtttacctggtatctcacttctgtactatgctttactaccccaggagatggg
ccacgcagttcacagcagttagtacagacattcgaggacaagcctggagcagtagggcac
ctgagcttcactgaaatactggacatgtctctgagagtcagctggcaggagccacaggag
aagaatgggatcattacaggctatcatgtcacgtgggaggtgtatggtaggaatgccacc
cgagtgacgcgcactctgcccaacagcactctggagtacaaggtcacagggctcacctcc
ctcaccacctacaccatcgaggtggcggcgatgacagccgctgggatgggtgtggtcacc
tcctcagccatctcctctggagtcccaccagaactccctggtgctccgtccaacctcatt
atctccaacatcagccctcgctctgccaccttgaagtttcgcgcaggcgatgacgggaaa
acctccatctcaaaatggattgttgaggggcaggttggggggatcggcgatgatgaagag
tggcgcattctgtacgagaaggcgaatgaccctgacccccaggtgctggagataccagac
ctcacccccttcactcactacaggttccggatgaggcaggtgaacattgtgggctccagt
ccggcgagccagccctcccgggtgattcagaccctgcaggcccctcctgatgtcagcccc
agcagcgttacagtccgcacggccagcgagaccagcctctggctgcgatgggtgcctctg
cctgattcggaatacaacgggaacccagagacggtgggctacaggatcagtgtgtggcga
gcagacctgcagggtgagcccaggacccagctggtgagcgagcgcctggagagggagatc
accctggaggggctgaaggagtggaccgagtacctgctgcgcatccaggccttcaattcc
atcgggcccgggccctggagcgaggtggtgcggggccgcaccagggagtcagttccatct
ggtgctccacaaaatgtgacgacagaggcagtgagctccacgagcatcttggtcacttgg
gttcctgttcctgagcatgagcgaaacggatacatccttggattcaaggtgctgtacaaa
gagaaggattcgggctcagaccctcaaatccacgtagtgaaagggaacctcacacagtct
gtcctgctcagaaacctgcgcaaatacgtcctgtatgagatccaggtgctggctttcacc
cgcattggtgacggcgttcccagctccccaccggtcctcgagagatccaaggatgatgtc
ccaggtcccccggtgcgactggtctttcctgaggtcaggctgacttcagtgagagtggtg
tggcagcccccagtggaccccaatggaatcatcatgggataccagatcgcatacaggctg
gctgccggcgacccaaacgaattcaccacggtggaggtgggctccaatgtcaggcagctg
acagtgaccagcctcaaatcagagtctgcctatgtgttccggatctctgccaaaacgcag
cagggctggggcgctccggagcaagctgcggtcatcacaacagaaagaagagatcggcca
gagcccccgaagaatctgtccatcactcagtcggaggtgtggtctcgggggctgctgttg
cgctgggttcctgggggagatgggtcctcccctgtacgctactttacagtgctgaccaaa
gagctgcctgatggagaatggcagactcactcctccgccattagtcacaacagcacctcc
tggcacgtagaccgacttaaacccttcacttcatacaagctgagaatgatggcgactaat
gatattggagacagtgaatacagcgcggagacagacacaattactactttacaagatgtt
cccgacgagccacctgttatattggctgtgactcctcacaccacatcttctgtccttgtt
cagtggcagcggccaaaggaggagagcttgaatggggtgctggtgggataccgcatctac
tacagagagctgcagtatgaaagtggacaacccaagtccaagaccaccgcaaacccttca
gcactgcaggtagaccggactgccaaaagcaccttcaagacagtgaacagtgctttgtta
acagcattcgaactaacacagctcaacaagtacaagcgttacgagatcgtgatgacggcc
tacaacattatcggggagagcccaaccagtgctccggtggaggtttttgttggagaagca
gctccatcgatggccccccagaatattcaggtgaaccccctaactgcaagtcagctggaa
atccagtgggaccccccaccagtggagactcagaatggaaacatccaggggtacaagatt
tattactgggagacgggcaattacaatgagacggagaaactgaagattttgttcctccct
gaagccacaatgaggctcaaaaacctgaccagctacacctcgtactccgtgaagatttct
gcattcaacgcagcgggggacgggccgcagagcgagcccagatggggcaggactcaccag
gctgctccaagtgcccccagttatatgacattctctgaggtcaccaccactactctgaac
gtgtcctgggggtttcctgtctggcccaatggggtcctggaaggataccgcgttgtctat
gagcccttggcaccaatacatggagtgagtaaggtggtgacagtggagatcaaaggaaac
tggcagcgctggctgaaggtccgtgacctcacaaagagggtgacctactccttcagagtg
caggccaagactatcgcctatggaccagaactggaagctaacatcacagccggaccttct
gttggatctcctgggtcccccctggaaccctcagtcaccaagtctgcctctacactcaca
ctccactggtctgcaggagacccaggcacagagccagtcacaggatacgccattgaggcc
cggccctccgatgaaggcttatgggacacatttgtgaagcacttgcctcccagcactaga
tctcacacagtcagcctggatcgtctcaggcagggcgtgagctatgagttcagggtgatt
gcaatcaataagtttggctacggtgagcctagtgtgccctctgctgtcttgtcagcccag
tctgaaaatcccttctatgaagaatggtggttcctgatagtgatggcactttgtggtctc
atcctcatactgtttatagtgttcggtttagtactgcacgggcagagcaagaagtacaag
agctgtaacctgggcaagaatatttccacagtggaggagtcagtcacactggataacggt
ggcttcacttcgctggagctcaacagcaggcacctgaatgtcaagagctccttcctaaag
aagaacgggacaaggtccccccctagaccaagccctggtggactgcactactctgacgag
gatatctgtaacaattacaatggagcagtgctgacagagagcaccactctcactgagaag
cctactgagatgtccgaatcagagaccacagacagcgattatgaggacgagcagcccaag
cactcctttgtgaaccactacatgagcgaccccacttactacaactcctggaaacggcag
caaaagggaatgaagcagtcttcaacgtacgcgtacgaggagtgtgcgagcggagatgct
gagtcctacttccagagcgtggtcaccactcacagctcggggggagtttacaccccagct
gggcagcctgctccagggtctcggactcccatcaccggcttctcctcctttgtttga
DBGET
integrated database retrieval system
