Polyodon spathula (Mississippi paddlefish): 121300529
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Entry
121300529 CDS
T07273
Name
(RefSeq) erbin-like isoform X1
KO
K12796
erbb2-interacting protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121300529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_2
PDZ_6
LRR_5
LRR_NXF1-5
DUF5945
Motif
Other DBs
NCBI-GeneID:
121300529
NCBI-ProteinID:
XP_041085032
LinkDB
All DBs
Position
2:complement(75228932..75326355)
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AA seq
1458 aa
AA seq
DB search
MTMKRNFFRLVPCRCLRGEEEAVTALDYSHCSLEQVPKEIFAFEKTLEELYLDANQIEEL
PKQLFNCQSLHKLSLPDNDLAVLPASIANLINLRDLDVSKNGIQEFPENIKNCKVLTIVE
ASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMS
KLIQLERLDLGSNEFTEVPEVLEQLTGLKEFWMDGNRLTYLPGVIGTLKQLTYLDVSKNN
IEMVDDRLSGCESLQDLLLSNNALQQLPGSTGSLKKLTALKVDENQLMYLPDSIGGLTSL
EELDCSFNEIEALPSSIGQFTNIRTFAADHNFLTQLPPEVGNWKNATVLFLHSNKLESLP
EEMGEMQKLKVVNLSDNRLKNLPFSFTKLSQLTAMWLSENQSKPLIPLQKEEDEETHKTV
LTNYMFPQQPRTEDFLANSDNESFNPSLWEEQRKQRAQVAFECDEDKDERETPPREGNLK
RYPTPYPEELKNMVKTAHTIAHRLKEDESSESGKETRQNEDAAVTVKDVGVKASENNCAN
GKNLESDPNATVNCVLKPSELDSKDTKDISQTAALVKTSENIRATINHEDTLEDSEDLSS
DEEEMKIAELRPPLIEISINQPKVVALSKDKKDESKDADSLLDETVANSNQNNSNCSSPS
RMSDSVSLTTDSSQDTSLCTPEKEAKVMIITKIRQDDENSNQLTETALLLQNGNGSDTSL
QAILKTQQAKEVQKEAIKMSDFEFTVDEKLSLIDRGMDLNNGMEISYNKWDQINMNISKL
SPDNMERLNALEKTKNTVQEDLKNKSLFNNNAKQAAEYYLENGNQYPKQALTNHLNGRFE
ETPRSPTKFEMVRTAAVGVTASADMSVSRSTEELSPQKQGPLGPVVKSQSVTNIEPGALK
IYHIIGDNGLHEPNAPGRVPAANVQGQNIVRSKSASLLNDQPLQVYPGSSASSSDLVSCT
KTLTKHDPNVKQQSSHAGRGVLPAGMQMPGGPQYNIQYSSSTMPKEGPWTQRTTIPPEHG
YLPSSHLQRSDSTDSYTKHTANTNYSNRNNAQASLAYSMQQRGPPRQMEMWAVNPQKERL
IPGGPRSTLQRQSSNSSSTSMSLGDPTQPRRIAAPAGDYLTYRDIHSMGRGPLMNQGMQR
PLSARTYSIDSPNIPRPQSARPSAHEVPERTMSISDFNYSRTSPTKRSNVRVKSEHSLLD
TQEVSRVPVDWRDQVMRHIEAKKLEKNMLSRSFNSNYAAVSSFHYGSARDLHGSQGSVAF
SVADGRHSGAHMFRDDVFSPRSPGYEMVVHGHKDVAMDTMRKVPLTNGQKCPTSRPQMNC
SQVHCPPSQAAMVRHPSREQLIDYLMLKVSHQSQAPSRQPHEIVQKEVYVKIEKNPELGF
SISGGVGGRGNPFRPEDKGIYVTRVQPEGPASKHLQPGDKILQANGYNFVNIDHGQAVSL
LKTFQSTVDLIVLRDVCA
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgaagcggaatttctttcggctggtgccatgtcgctgtctgcgaggagaggag
gaggcagtcaccgcgctggattactctcactgcagcctggaacaggtgcccaaggagata
ttcgcattcgagaagaccttagaggagctctatttagatgctaaccagattgaggagctt
cccaagcaattgttcaactgccagtctcttcataaactgagtttgccagataacgaccta
gctgtattgccagcctccatcgcaaacctcattaatctcagggatctggacgtcagcaag
aatggcatccaggaatttccagaaaacatcaagaactgcaaggttttaacaatagttgaa
gccagtgtgaatcccatttcaaaactacctgatggattcacccagcttctcaacctaacc
cagctgtacctgaatgatgcctttttggaattcttaccagcaaatttcggcaggttaacc
aaactgcagatactggagctgagagaaaaccagttaaagatgttgccaaaaaccatgagc
aagctgatccagctggagagactggatctgggaagcaatgagttcacagaagtgcctgaa
gttcttgaacaactcactggtctgaaggagttttggatggatgggaacagactgacatac
ctcccaggggtaattgggacgttaaagcagctgacctatttagatgtatccaagaacaac
attgaaatggttgacgatcgactgtctggttgtgaaagcctgcaagacctgctgctctcc
aacaatgcactgcagcaacttccaggatccacaggttccctgaagaagttaacagcactt
aaagtggatgaaaaccagttgatgtacctgccagattccataggaggactcacatccctc
gaagaacttgattgcagttttaatgagatagaagctttgccgtcatccattgggcagttc
accaacatccggacctttgctgcagatcacaactttctgacacagctgcctcctgaggtt
ggtaactggaagaatgcaaccgtgctgtttctacactcaaacaaactggagtccctgcca
gaggaaatgggagaaatgcagaaacttaaagttgtcaatctgagcgacaacaggctgaag
aatctgccctttagctttaccaaattgagccagctgacagcaatgtggttgtcggaaaac
cagtccaagccccttatacctcttcagaaggaggaggatgaggagacacacaaaaccgtg
cttaccaactacatgttccctcaacagccgaggacagaggatttcttggccaactctgat
aatgagagcttcaatccttcattgtgggaggaacagaggaaacaaagagcacaggtggcc
tttgagtgcgatgaggacaaagatgagagagagacaccacccagggaggggaatctgaag
cgctacccaacaccttacccagaggaactaaaaaacatggtgaaaactgcacacactata
gcccatcgactcaaagaggatgagtcgtcagagtctggaaaagaaaccagacagaacgaa
gatgcagctgttacagtgaaagatgtaggtgtaaaggcttccgagaataattgtgcaaat
ggaaaaaacctggaaagcgatccaaatgcaactgtgaattgtgtgctaaaacccagtgaa
cttgattctaaggacactaaagacatttcacagacggctgcacttgttaagacctctgag
aacattcgagctacaatcaaccatgaagacacacttgaggactctgaagacctgtcctct
gatgaagaggagatgaagattgcagagttgcgaccgccgcttattgagatctctattaat
cagcccaaagtggtggcactaagtaaggacaagaaagatgaaagtaaagatgctgattct
ttattggatgagactgttgcaaacagtaaccagaacaacagcaactgctcctcgccatct
cgcatgtcagactctgtgtccctgacaacagacagtagccaggacacttccctctgcact
ccagagaaagaggcaaaggttatgattattaccaagatcaggcaagatgatgaaaattca
aatcagttgacggaaacagcactcctccttcagaatgggaatggttcggacacctctctg
caggccattctgaaaactcaacaggctaaggaggtgcaaaaggaagccatcaaaatgtca
gattttgagttcacagtggacgaaaaactgtccctcatagacaggggtatggatttaaat
aatgggatggaaatttcttacaacaaatgggatcaaatcaatatgaatatatctaagctc
tctccagataatatggaaaggttaaatgcccttgaaaagaccaagaacacagtccaggaa
gacttaaaaaataagtctttgtttaacaacaatgctaaacaagctgcagagtactacctg
gagaatggtaaccagtatcctaaacaggctcttactaatcacctcaatggtcgatttgaa
gaaactcccaggtctccaactaagtttgagatggtgagaacagctgcagttggtgtaaca
gcaagtgcagatatgtctgtctctaggagcactgaggaactgtccccacagaagcagggg
cctttggggcctgtggtgaaatctcaaagcgtaactaacatcgagccaggagcgcttaaa
atataccacattattggtgataatggattgcatgagccaaatgctcctggaagagtacct
gcagctaatgttcagggacagaatattgtccgcagcaagtcggcatctcttcttaatgac
caacccctgcaggtctaccctggctcttccgcatcttcatctgaccttgtttcctgcacc
aaaactttaaccaaacatgatcccaacgtcaaacagcaaagctcccatgcagggagggga
gtcttgcctgctggcatgcagatgccaggagggcctcaatataacatccaatactcaagc
agcacaatgcccaaagaaggcccctggacccagagaacaacgatcccaccagagcacggg
tatttgccatcctctcacctgcagcggtcagacagtactgacagctacacgaaacacacg
gccaacacaaactactcgaaccgcaacaacgcacaggccagcctggcctacagcatgcag
caacggggtccgcccagacaaatggagatgtgggcagtcaatccccagaaagaaagactg
ataccaggtggtcccaggagcaccctgcagaggcagagtagcaattcctcctccacatca
atgtctcttggagacccaacacaacccaggcgcattgcggcccctgctggagactactta
acctacagggacattcacagcatgggaaggggaccactgatgaaccaggggatgcagaga
cccctttccgccaggacctacagcatcgacagccccaatatcccccgaccgcaaagcgca
cggccatccgcacatgaggtgcctgagagaacgatgtccattagtgatttcaattattca
cggactagccctaccaagcggtccaatgtgagggtgaaatcagagcactcgctgctcgac
acacaagaagtcagcagagtacctgtcgactggagagatcaggtgatgcggcacatcgag
gcaaaaaagttagaaaagaacatgctgtctaggtcctttaattccaattatgctgcagtt
agcagctttcactatggcagcgctagggatctgcatggcagccagggcagtgttgccttt
agtgttgcagatggaaggcattctggagcgcacatgttccgtgacgatgttttctctcca
agatcgcctggctacgaaatggttgtacatggtcacaaggatgtggctatggacactatg
agaaaagtgcctttgacaaatggacagaagtgcccaacttcccggccccagatgaactgc
agccaagtccactgtccgccttcccaggccgctatggtgaggcatccctccagggagcag
ctgattgattacttgatgctaaaagtatcccaccagtcccaggctcccagcaggcagccc
cacgagattgtgcagaaggaggtgtatgtcaaaatagagaagaatcctgagctgggcttc
agtatatcaggaggcgttggaggcagaggaaatccatttcgaccagaagataaaggtata
tacgtaacaagagtccagcctgaaggacctgcttcaaaacatttgcagccaggggataag
atccttcaggccaatggatacaactttgttaatatagatcacggacaggcagtttccctg
ctaaaaacttttcagagcactgtggacctaatcgttttgagagacgtttgtgcataa
DBGET
integrated database retrieval system
