KEGG   Polyodon spathula (Mississippi paddlefish): 121300531
Entry
121300531         CDS       T07273                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121300531
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pspa01009]
    121300531
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pspa03021]
    121300531
Protein phosphatases and associated proteins [BR:pspa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121300531
Transcription machinery [BR:pspa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     121300531
    Little elongation complex (LEC)
     121300531
SSDB
Motif
Pfam: ELL Occludin_ELL Seryl_tRNA_N
Other DBs
NCBI-GeneID: 121300531
NCBI-ProteinID: XP_041085030
LinkDB
Position
26:complement(20110719..20131069)
AA seq 634 aa
MAALQEERSYGLSCGRLGNGSSVSVFHVKLTDSALRAFEGYQNSKSSMSNRLSIRFTGKQ
GQIAIPRPECPNELRTFSFYLSNVGRDSPQGSFDCMQQYVTGDGSIQLDCLGGIQDKITV
CATDDSYQKARQSMAQVEEETRSRGAIVIKPGGRYVGKEACSTGRYYHDQEKCESNSSTS
GKKFGRVPCSCPGVDSSNSGPAHLFPASETLLPHLVGRVAHRGRSRKSLAETGLVGVVFL
QLIFLPSLQVANLNGRDGTYTLKGLMFKEVQKDWPGYCEGDQQLLKRILVRKMCQPQSSL
GVAGETPASPPKEHSNSASPSQKRPAVDFIDPLANKKPRISHMTSKAQGALNGKVGSSNG
KDSALGVPAPLLADPVSSSSHLHRLEIPRPYDPLSDVSNDSSHNGRDCEGQEAAAAERLS
HPPAPSAGLPVQTSEATFPSATAGTPASAPGATSASLHGKSKKKSKKHKDKEKSKDRSAE
PKRGCEFITETKGSGVPPSSTDLNGACSNSSVPTSTSEMPDYLLKYSLIASQDQRQSYKN
DFNAEYNEYRGLHARIESITRQFTVLDTELKQLEQGTETYKTIHNQILQEYRKIKKSNPD
YSQEKNRCEYLHSKLAHIKKLIAEYDHQHLQSWH
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggcggcgctgcaggaggagcggagctacgggctgtcctgcgggagactcggcaatggc
agcagcgtctccgtgtttcacgttaaactgactgacagcgccctgagggcctttgagggt
taccagaacagcaagagctccatgtctaatcgtctgtcgatccggtttaccgggaagcag
gggcaaatcgcaatccccaggccggagtgcccgaatgagttacggaccttcagcttctac
ctgtccaacgtgggccgggacagcccccaggggagctttgactgcatgcagcagtatgtc
actggggatgggagcattcagctggactgcctgggcgggatacaggataaaatcactgtg
tgtgccacggacgactcctatcagaaagcccggcagagcatggcacaggtggaggaggag
acccggagccgaggggcaatcgttatcaaaccgggagggagatacgtgggtaaggaggcg
tgttctactggtaggtactaccacgaccaggagaagtgcgagtccaattcttccacgtca
gggaagaagttcggccgggtaccgtgtagctgcccgggggtcgactcctccaattccggg
ccggcccacttgttcccggcgtcagaaactttgcttccccacctcgtcggtcgggtcgcg
caccggggccggtcccggaagtccctcgccgagactgggctggtcggggtggtgttcttg
cagttgatttttcttccctccctccaggtggcgaatctgaatgggagggacggcacctac
acgctgaagggcttgatgtttaaagaagtgcagaaagactggcctggatactgcgaggga
gaccagcagctgctgaagaggatactggtcaggaagatgtgccagccccagagcagcctg
ggtgtagccggggagacccctgcaagcccacccaaagagcacagcaactctgcctctccc
tctcagaaacgccccgctgtggacttcatcgacccgttggccaataagaagccccggatc
tcccacatgaccagcaaagcccaaggcgcgttgaatgggaaggtgggctcctccaatggg
aaggatagtgctcttggggtcccggcgccgctcctggctgatccggtgagctccagctcc
cacttgcacaggctggagatccccaggccctacgaccccctctcggacgtcagcaatgac
tccagccacaacgggcgggactgcgagggacaggaggcagcggcagcagagcggctgagc
caccccccggcccccagcgcagggctccctgtccagaccagcgaagcaaccttccccagc
gccacagccggaacccctgcctctgcccccggagccacctccgcatccctgcacgggaaa
tccaagaagaaatcaaagaagcacaaggacaaggagaaatccaaggacaggagcgcggaa
ccgaagagaggctgtgaatttataacagagacgaaagggagcggtgttccaccaagcagc
acggacctgaatggggcgtgcagcaattctagtgttcctacatccacatcggagatgcca
gactatttattgaaatactcgctgatcgcatcccaagaccagcggcagagttacaagaac
gacttcaacgcagagtacaacgagtacagaggcctgcacgccaggatagagagcatcacc
cggcagttcactgtgctggacacagagctgaaacagctagagcagggcacagagacatac
aagacaatccataatcagatcttgcaagagtatcggaaaattaaaaagagtaatcccgat
tacagccaggagaagaaccgctgtgaatacctgcacagcaagctggctcacataaagaaa
ctgatagcagagtatgaccatcagcacctgcagagctggcactag

DBGET integrated database retrieval system