Polyodon spathula (Mississippi paddlefish): 121300543
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Entry
121300543 CDS
T07273
Symbol
gtpbp3
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121300543 (gtpbp3)
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
121300543 (gtpbp3)
Prokaryotic type
Methyltransferases
121300543 (gtpbp3)
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GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
RsgA_GTPase
FeoB_N
AAA_16
Dynamin_N
cobW
MMR_HSR1_Xtn
ABC_tran
AIG1
Motif
Other DBs
NCBI-GeneID:
121300543
NCBI-ProteinID:
XP_041085045
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Position
26:complement(18929776..18938745)
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AA seq
503 aa
AA seq
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MFRMISGALVRRCSGVSTCLRFALRPLCSAPGPGYCPTIFALSSGHGKCGVAVIRVSGPA
SASALRSLAGMTHLLPAPRTAVLHSLLDPGTGEPLDRGLVLWFPGPHSFTGEDCAEFHVH
GGPAVISGVLQALGSLPGLRPAEAGEFTRRAFQAGKLDLTEVEGLGDLIHAETEAQRRQA
LRQMAGDLGRLYQGWSQALTRNLAHMEAFIDFSEDENIEEGVLNQVDVSVEQLREELEAH
LRDGRRGERLRNGVQVVIAGETNAGKSSLLNTICQRPAAIVSPVAGTTRDVVEAPLDIGG
FPVLLSDTAGLRDTQDSVEREGVRRARERVEQADLTVAMLDVAEFPEDLTRLPQFLPEYL
KKVLGDSQRPCLLVLNKTDLLSGEQLDSLRGVLAWATGLPPICLLSCTTGDGLEHFLGVL
QKQVESMCGNPLVGAPSLTQARHRVHLVRCVEALAQYQHYRELDLALAAEGLRLGLTSLG
RITGRVGAEQILDLVFKDFCIGK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaatgatttctggagcgcttgtcagacgctgttcgggtgtctccacgtgttta
aggttcgctctgaggcccctctgcagtgctcccggcccaggatactgccccaccatcttt
gcgttgtcctcgggccacgggaaatgtggggtggcagtgatccgagtcagtggcccggcc
tcggccagtgctctccgcagcctcgctgggatgacgcatttactcccggcccccagaacc
gctgtgctgcacagcctcctggaccccggcacgggggagccactcgaccgggggctggtg
ctctggttcccaggtccacacagctttacaggggaagactgtgctgagttccatgtgcac
gggggcccagcagtgattagcggagttttacaagccctgggaagcctgcccggcctgcgc
cccgctgaagctggggagtttactagacgtgccttccaggcggggaagctggatctgaca
gaggtggaggggctgggggacctgatccacgccgagacagaggctcagaggaggcaggcc
ctgcggcagatggctggagacctggggcgattgtaccagggctggagccaggccctcacg
cggaatctggctcacatggaagctttcattgatttcagtgaagatgagaatattgaagag
ggcgttttaaaccaagtggacgtctcggtcgagcagctgcgggaggagctggaggctcac
ctgagggacgggcggcggggtgagcggttacgaaacggagttcaggtggtcatcgccggg
gagaccaacgcggggaagagcagcctcctcaataccatctgccagcggccggcagctatc
gtgtctccggttgccgggacgacgcgggacgttgtggaggcgccgctggacatcggggga
ttccctgtgctgctgagcgacacggccggactgagggacactcaggatagtgtggagaga
gagggggtgaggcgggccagagagagggtggagcaggcggacctgaccgtggccatgctg
gatgtggcagaattccctgaggacctcacaaggttgccacagttcctgcctgaatacctg
aagaaggtcctaggtgacagccagagaccctgcctactggtcctcaacaaaactgacctg
ctgagcggggaacagctggacagcctcagaggggtcctcgcctgggctacagggctgccc
cctatctgcctgctgtcctgcacaacgggagacggactggaacacttccttggggtcctt
caaaagcaagtggagagcatgtgtgggaaccccctggtgggcgccccaagcctgacccag
gcccgccaccgcgttcacctggtcaggtgcgtggaagcgctggcacagtaccagcactac
cgggaactggacctggcgctggctgcagaagggctccgcctcggcctcaccagcctgggc
agaatcaccggcagggtgggtgcagagcagatcctggacctcgtattcaaagacttctgc
attggcaaatag
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