Polyodon spathula (Mississippi paddlefish): 121300546
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Entry
121300546 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF1-like
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121300546
03036 Chromosome and associated proteins [BR:
pspa03036
]
121300546
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121300546
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121300546
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
121300546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_10
zf-RING_5
Rad60-SLD
PHD_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
121300546
NCBI-ProteinID:
XP_041085050
LinkDB
All DBs
Position
26:19189565..19197279
Genome browser
AA seq
786 aa
AA seq
DB search
MWIQVRTMDGKETHRIDSLSKLTKVDDLRLKIAELFKVEPERQRLFYRGKQMEDSHTIFD
YNVGLNDIVQLLVRQAVPNCPPAVPKEAELSDTDSGCGSAQSESDKNSNNGEEVEGQAGT
SAQSDPVEPAFGCYKINEFVDACDLNMGAWFEAQILNVTKEPKSSSESGEDKSDSAKPSK
EETVVMYHVKYEDYPENGVVKLTGKDVRPRARTVYQWHQLEVGMVVMVNFNPDEPKERGF
WYDAEIQRKRETRTGREIYGKILLGDAGDSLNDCKIMFVNEIYKIEEPGSAEGAALESPM
KRSNGPECKHCKDDPKKNCRMCNCHVCGVKQDPDKQLLCDECDQAFHMYCLDPPLTSIPD
DEDWYCPSCRNDASEVVLAGEKLKESKKKSKMASANSSTQRDWGKGMACVGRTKQCTIVP
SNHYGPIPGVPVGTQWKFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDAGN
EFTYTGSGGRDLSGNKRTAEQSCDQKLTNMNRALASNCNAALNDKDGAEAKDWKAGKPVR
VVRSSKGRKHSKYSPEDGNRYDGIYKIVKYWPEKGKSGFLVWRYLLKRHDDEPAPWTRDG
KERIKKLGLTMQYPEGYLEAQAAKEKEKENKKEDEEEEEVETPSKGKRKRKSQIDKETSS
PVKSTPKKMKVEAYKLTKEQKGLIKEDELNKKVWDEALTSLKEGPKFLNKVEEVFLCICC
QEVVFQPVTTECQHNVCRECLQRSFKADVYTCPACRHDLGKNYSMTVNKPLQSLLNQFFP
GYSSGR
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccaggtgcgtactatggatgggaaggagacccaccggatcgactccctttct
aagctgaccaaggttgacgatctccggctcaagatcgcggaattgtttaaagtggagccc
gagaggcaaaggcttttttacaggggcaagcagatggaagacagccacaccatcttcgac
tacaatgtgggattgaacgatatcgtccagctcctggtccgacaggctgtccctaactgc
cccccagctgttccgaaggaggcggagctctctgatactgattctggctgtggctccgcc
cagagcgagtcggacaagaactccaataacggggaggaggtggaaggccaggctggcacc
tctgcgcagtctgatcctgtagagcctgcattcggctgctacaagattaacgagtttgtg
gacgcctgtgacctgaatatgggagcctggtttgaagctcagattctcaatgtgactaaa
gaacccaagagttcaagcgagtctggagaggataaaagcgattctgcaaagcccagcaaa
gaggagaccgtggttatgtatcacgtcaaatatgaagattatccagagaatggtgttgtg
aagctgactgggaaggatgtccgcccccgtgccaggacagtgtaccagtggcaccaacta
gaagtgggcatggtagttatggtgaacttcaaccctgatgaacccaaggagaggggtttt
tggtacgatgcagaaatccagaggaagagagaaacacgcaccggacgtgaaatatatggc
aagatattgcttggagatgctggtgattctctaaatgactgtaagatcatgtttgtgaat
gaaatctacaaaattgaagagccaggaagtgcagagggtgctgctttggagagccccatg
aaaagatcaaacggcccagagtgtaagcactgcaaggatgacccaaagaagaactgccgc
atgtgtaactgccatgtgtgtggggtgaagcaggatccagacaaacagcttctgtgtgat
gagtgtgaccaggccttccatatgtactgtctcgaccctcccctaacctccatcccagat
gatgaggactggtactgcccgagctgtaggaatgatgcaagtgaagtagttttagctgga
gagaagctgaaggagagcaagaagaaatctaagatggcttctgcaaactcatccacccag
agagactggggcaagggcatggcttgtgttggtcgtacaaagcagtgcaccattgtacct
tcaaatcactatggaccaatccctggagttcctgtggggacacagtggaagtttagggtg
caggtcagtgagtcgggagtgcataggccgcatgttgcaggtattcatggaaggagcaac
gatggagcctactcgctggttttggctgggggatatgaagatgatgtggatgccggcaat
gaattcacctatacaggatctggaggccgtgatctgtctggaaacaagcgtacagctgaa
cagtcttgtgaccagaaactcacaaatatgaacagagctttggcttcaaactgcaacgct
gctttgaatgacaaggatggagccgaagccaaggactggaaagcagggaagccagtccgt
gtggtcaggtcctctaagggacgcaagcacagcaagtacagcccagaggatggcaacaga
tacgatggcatctacaagattgtgaagtactggccagagaaaggaaagtctggcttcttg
gtctggaggtatttattaaagcgacatgatgatgagccagccccatggaccagagatggg
aaggagaggataaagaagctggggcttactatgcagtacccagaaggctacttggaggct
caggctgccaaggagaaggaaaaagaaaacaaaaaggaagatgaggaggaggaggaggtg
gagactcccagcaaaggcaaaagaaagagaaaatctcaaatagataaggagacttcttcc
ccagttaaaagcacacccaaaaagatgaaagtggaggcatataaactgacaaaggagcag
aaagggcttattaaggaggatgagctcaacaagaaagtttgggatgaggctctgacctca
ctcaaagaaggaccgaaattcctgaataaagtggaagaggtattcctgtgtatctgctgc
caggaagtggtttttcaaccagtcacaacagagtgccagcataacgtctgcagggaatgt
ttacagcgctcgttcaaggccgacgtctacacatgtcctgcttgccggcatgatctgggc
aagaactacagcatgactgtcaacaaaccactgcaaagccttttgaaccagttctttcca
ggatacagcagtggccggtga
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