KEGG   Polyodon spathula (Mississippi paddlefish): 121300577
Entry
121300577         CDS       T07273                                 
Name
(RefSeq) WD repeat-containing protein 90-like
  KO
K24759  WD repeat-containing protein 90
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pspa03037]
    121300577
Cilium and associated proteins [BR:pspa03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   121300577
SSDB
Motif
Pfam: Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_CDC20-Fz WD40_Prp19 CFA20_dom WD40_MABP1-WDR62_1st Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_WDR19_1st DUF7165 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 121300577
NCBI-ProteinID: XP_041085099
LinkDB
Position
26:15570774..15583929
AA seq 1398 aa
MSKVWQHPYVNVFKHFKIEEWKKSTKEGDVTTFMDKTLKCTVYRIRGPVPASNYILLPKT
STQSLGLTGRYLYLLFKPIPDKHFVVHLDLATEDGQVIRVSFSNLFKEFKSTATWLQFPF
LCGAAKGSVYESTARTARQDLVGPAPASVRWTCLMMDLQYLLSMYLNRRYSHLKSIKLCA
SMLLKNLFTSDLLIDPGLTFIEAKQAGAVMQGSGPMPREMCFPVPKGGSWHDLYDYIRFP
SDGGKMPFDSIQKGRATADPNSNAVRELPRNVNLSKPVQDRVSLIQQITSPKPWPRRRAP
LLAVSVPQLPPVSSASQGRSLHDSWRAEALESDRKEDPGTSGDSVALLTADDGGIHVFAH
RDEEVSVHRHNSSTEETVCTRVTGPVSLPAKKVAEHTKLQPDPILKLNRIIGFGGCTTKC
TLWTKTGTAVVYPCHAVIVSMDIASGQQRFFIGHTDKVSALTFNGNCTLLASAQTGNMSV
VRVWNFQKGSCLSLFKTHTHSVSSLSFSYSGGVLCGVGKDNHGKTMVVVWNTLKVNKGGE
VVVMAKAHTDVDIQTMKIAFFDDTRMVSCGRDNIRLWRVRSGSLRSCPVNLAEYHAVEFT
DVAFEQGHFADREPEDRTLFACSKSGHILEIDYMSVSIKNVRRLLPSQQKHSQRREKQTF
STGLGIAINSISISSAFCATGSDDGYLRLWPLDFSTVFLEAEHEGPVSLVNIGPEGVHVL
AATSTGNLGYLDVSSRAYSTLMRSHTDTVLGFSIDGIRRNIVTVSLDNSVRVWDFDSMQQ
LFDFISEDTPCAVAFHPVQQVFACGFNSGLVRVFNIASSSLLAEHKQHRGQVIGLAFSPD
GENMYSAGSLGSLALYNSVEEDHHILRVLGNVVARGSERSPEALTVSSDSRSLAFVGPAE
YTVTVMDARSLDELMRIDVSILDLLSTSLDSAVKVCFAPVATGHLLVTTSSNKILWINAK
SGRLIREIPNAHKHVCSSVSVTDDARFLLTAGDKAVKVWDYHMKHDINFQVFIGHSQMVQ
QVTFTPDQLGVVTAGDAVYIWDFLANPHEPQKSREVPAPAPAVTQSPFKSVGDPELHLSR
ALLSNGMPREAVPVPSSSSPPCLDISVIERTGQGFFSLCEEVEGPALGSSSTGAARGSFL
RVTVPPSGRENSPVRGKPSLQNELDLLGDDVLHEEEEEGEKTLVRPDAYKHFTPRFRTSA
LAQDAVAPPAGKESLRLKAVIGYNGNGRGNMVWNPDTGLFAYSCGCVVVLEDLHAGSQKH
WVGHTEEISTLAVTNDAQTVASASGGSDGACSLICIWNVQDGSRRSTISYHKGAVQAMTY
SRDDFFLLSAGDYRDPGIALWSTNSYQLLTSVHLAEPIHDLSFNPASASQLTCVGSSGAM
FCLIEQQGKDARLKVSTG
NT seq 4197 nt   +upstreamnt  +downstreamnt
atgtctaaagtgtggcagcatccctacgtcaacgtcttcaagcacttcaagattgaagaa
tggaagaagtcaacgaaggagggagacgtgacaacatttatggacaagacgctgaagtgt
actgtgtatcggattcgaggacccgttcctgcgagtaactatatccttctgcctaaaaca
agcacacagtccctgggcctgaccgggcgctacctctacctgcttttcaaacccatcccg
gacaaacactttgtggtgcatctagatttagcaacagaggatggccaagtgatccgcgtc
tcgttttcaaacctgttcaaagagttcaaatcaacagccacgtggctgcagttcccattc
ctctgtggagcagccaaggggtcagtgtacgagagcaccgccaggaccgctcggcaggac
ctagtgggtcctgccccagccagcgtgcgatggacctgcctaatgatggacctgcagtac
ctcctgtccatgtacctgaatcgtagatacagccacctgaagagcatcaaactgtgtgcc
agcatgctgctgaagaatctgtttaccagcgacttgctcattgacccaggcttgactttc
attgaagccaaacaggccggagcagtgatgcaaggcagcggcccgatgccaagagaaatg
tgtttccctgtgccgaagggagggagctggcatgacctctacgactacattaggtttcca
tctgatggaggcaagatgccctttgactcgattcagaaaggacgagcaacagctgacccg
aattcaaatgctgttcgagagttaccacgtaatgtgaatctcagcaagccagtccaggac
agagtctccctaattcagcagattaccagccccaaaccgtggccccgtcgtcgagctccc
ctgttggctgtgagtgttcctcaattgccccctgtgagttctgcgtcacagggcaggtcg
ctgcatgacagctggcgggctgaagcgctggagagtgatcgtaaggaagatcccggtacg
tcaggggacagcgtggcgcttctcactgcagacgacggtgggatccacgtgtttgcccac
agagatgaggaagtcagtgtccacagacacaacagctccacggaagagaccgtgtgcaca
agagtaaccggaccagtgtcactgccagctaaaaaagtagcagaacacacaaaactgcaa
ccggatcctattctgaaactcaacaggatcatcggctttggaggctgtaccactaaatgt
actctatggacaaaaacaggaacagcagtggtgtacccctgccatgctgtaatagtctcc
atggacattgcatcaggacagcagagattttttattggtcacacggacaaggtctctgct
ctgacattcaatgggaactgcactttactggcatcggcacagacggggaacatgagcgtg
gtgcgtgtctggaatttccagaaagggagctgcctgtcactgtttaaaacacacacgcac
tctgtctcctctctcagcttctcttacagtggcggagtcctgtgtggagtggggaaagat
aatcatggaaaaactatggttgtggtgtggaacactttgaaggtgaataaaggaggcgag
gtggtggtgatggccaaagcacacaccgacgtggacatacagaccatgaaaatagcattc
ttcgatgacaccaggatggtgtcctgtgggagggacaatatccgtctgtggcgagtgagg
agtgggtccctgcggtcctgcccagtcaatctggctgaatatcatgctgtggaattcaca
gatgtcgcattcgaacaaggacacttcgccgacagggaacctgaagacaggactctattc
gcctgcagcaagagtggacacatcctggaaatcgactacatgagcgtgtcgatcaaaaat
gtgaggcgcctgctcccgtcccagcagaaacactcgcagcggagagagaagcagaccttc
agcacaggacttgggatcgcaataaacagcatcagtatctcatctgccttctgcgctacg
gggtcagatgacggatatcttcggctctggccccttgatttttccactgtgtttttggaa
gcagagcatgaaggaccggtgagtttggtgaacattggtccagagggggtgcatgtcctc
gctgccacctcgacaggaaacctggggtacctggatgtgagcagccgagcgtacagcaca
ctgatgaggtctcacacagacacggtgctgggctttagcattgatgggattcgcaggaac
atcgtcacagtgtctctggacaacagcgtccgggtctgggattttgactcaatgcagcag
ctgtttgactttatctcagaagacaccccctgtgctgtagctttccacccagtgcagcaa
gtgtttgcctgcgggttcaactccgggcttgtacgagtcttcaacattgccagctccagt
ctcctcgcagaacacaagcagcaccggggccaggtgatcgggctggcattctccccggac
ggagagaacatgtacagcgctggctctctgggctccctggcgctgtataactcggtggag
gaggaccatcacatcctccgagtcttgggcaatgtggtagcgagaggcagtgagcgcagt
cctgaggcgttgactgtgagcagcgacagcaggagcctggcctttgttggccccgcggag
tacactgtcacggtgatggatgcccgttccctggatgagctcatgcggatagacgtgagt
atcctggacctgttgagcacaagcctggactctgctgtaaaggtctgctttgctcctgtt
gcaaccggacacctgctagtgaccacatcgtccaataagatcctctggataaatgccaag
tctggacgactgatcagagagattcctaatgcccataagcacgtgtgttcctctgtgtcc
gtgactgatgacgcacgcttcctgttgaccgcaggagacaaggcagtcaaagtctgggat
taccacatgaaacatgacatcaacttccaggtcttcatcggtcattctcagatggtccaa
caagtgaccttcacgccagaccaacttggggtcgtcaccgcaggagatgctgtgtatatt
tgggatttcctggccaatcctcacgaaccacagaagagcagagaggttcctgcaccagct
ccagctgtgacacaatctccttttaagtctgttggggacccagaactgcacttgagtcgg
gcgttactgtcaaacgggatgcctcgagaggctgtgccggttccttcctcctcctcccct
ccctgcctggatatcagcgtcatagagcggacgggacaaggtttcttctcgctgtgtgag
gaggtagaggggccagccctgggcagcagctctacaggagcagcgaggggctccttcttg
cgggtcacagtgcctccttcaggcagagagaactcaccagtgagggggaaacccagcctg
cagaatgaactggatctattgggagacgatgtgttgcatgaagaggaagaggagggggag
aagaccctagtccgtccggatgcctataaacacttcacaccgcgcttcagaacgtcagcc
ctggctcaggatgcagtggctccccctgctgggaaagagagcttgagactgaaggcagtg
atcggatacaacggaaatggacgagggaacatggtttggaatccagatacaggtttgttt
gcatactcgtgcggctgtgtggtagtgctggaggatcttcatgcaggctcccagaagcac
tgggtcggacacacagaggagatctcaaccctggctgtcaccaacgatgcacagacagta
gcttcagcctcgggaggcagtgatggggcttgcagcctgatctgcatctggaatgtgcaa
gacgggtccaggaggagtaccatctcttaccacaagggggcggtgcaggcaatgacgtac
tccagagacgacttcttcctcctttctgcaggagattacagggaccctggcattgctctc
tggagcaccaacagttaccagctgctgaccagtgtccaccttgcagagccaatccatgac
ctctccttcaaccctgcctccgccagccagctgacctgcgtgggcagcagtggggcgatg
ttctgcctcatcgagcagcaagggaaggacgcgcggttaaaggtgagtacagggtga

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