Polyodon spathula (Mississippi paddlefish): 121300585
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Entry
121300585 CDS
T07273
Symbol
brat1
Name
(RefSeq) BRCA1-associated ATM activator 1
KO
K23112
BRCA1-associated ATM activator 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121300585 (brat1)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121300585 (brat1)
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_EZ
HEAT_2
PDS5
Cnd1
Cohesin_HEAT
RTP1_C1
Mo25
Arm
Motif
Other DBs
NCBI-GeneID:
121300585
NCBI-ProteinID:
XP_041085111
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All DBs
Position
26:complement(8048020..8054615)
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AA seq
813 aa
AA seq
DB search
MERECAELLPSVCAVLADSRESVPDDTCLEKLLDWFKEQTGKVPGLSLLQQNPCLTDLIS
SVHKLRDLEPSVLSFISRLAGLFAASEDVFYCLEHQSILTELFDNRDSWQDATVRCGWIH
GLLSMLRHWPAMKFILKHERIQVIFKLQRDSSLFVASAANRLLAHILTFPKLQEASPGSV
YCEWTECVKEIAGHVEDSLESGIPQHVQQSLKLVTLALGNCQPVVMEMLWQKVGGHVESL
LEKDPSNMAQRLLELLLVASRTPLFSSADSQVVTVMSLMLCSLTPTLAIPLASGILKLEN
CPESLRIKALRVVLHPMDCILKVTDQQPQNAGLLDEFVCKESFIEDQLSRKTSCISLLCL
SLSHAGELADVPSASVELSSGSLLSSVVAVLQLCIGIAVPTTPACICRHLIGCVRVQRFA
VDTLGSLSKQAGSTDFVEQVFNILLEYLINPDTESSVLKKVMQAILQWFSRHSDLPVVWH
SLSQDLFPVLKKRLCDVRWEVRDSALEFLTQLTLNFQGKTEFPPILLSSGILKLLLDLLS
DSESYVRASAVTALGQTAYITNNNEETLNSESGTSVQEDIASRLVDILAQDTEGFPRRAV
VKVFADWLKQHSRLTIQNFEESAASVLKYGSNDLDWEVKIHSLEMAEVCINQTLSKSSLS
SCPYAVIQSENSKNEKLTESLQKLCSLKIFEVLLAGLYDCDRPVAQKACTILISLKQVVL
EDREALDLKGLTWAPDILSKCFSKHSKMAVCGETNPSLQAGGNLVEILSILDLETMQQTL
ERSSDYIENSPRSLLQDILAATETTEDNAIDCY
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggagagagaatgtgcagaactgttgccctctgtctgcgcagttttagcagattccagg
gaatccgtgccagatgacacctgtttggaaaaactgctggactggttcaaggagcagact
ggcaaagtgccagggctgtctcttctgcagcagaatccatgtttgacagacttgataagc
tctgtgcacaagctgagggatctggagcccagcgttctctccttcatcagcaggctggct
gggctgttcgctgcctctgaggacgttttctattgcttagagcatcagagcatcttgaca
gaactctttgataacagggactcctggcaggatgcaactgtgcggtgtggttggatccat
gggttactgagcatgcttcggcactggcctgccatgaagttcatcttgaagcatgaacgg
attcaggtgatctttaagctgcagagggactccagcctctttgttgcttctgcagccaac
cggctgttggcacacatactaacattcccaaagcttcaagaagcctcacctggctctgtg
tattgtgaatggacagagtgcgtcaaggagattgctggacatgtagaagactcattggag
tctggcattccgcagcatgtccagcagtccttaaagcttgtgactctggctttgggaaac
tgccagccagtggtcatggaaatgctgtggcaaaaggtaggcgggcatgtggaatcattg
ctggagaaggatccgagcaacatggcacagagattgctggaactgctactcgtcgcatct
aggaccccgctgtttagcagcgcagactcccaggtagttactgtgatgagtctcatgctg
tgttctctgactccaacacttgctattccgttggcttctggaattttgaaacttgagaac
tgtccagaaagcttaagaatcaaggctctaagagtggtccttcacccaatggattgtata
ctaaaagtcactgaccagcagcctcaaaatgcaggcttgctggatgaatttgtttgtaag
gagtcctttattgaagatcagctgtctagaaaaacatcatgtatctctctcctgtgtctc
tcactttctcatgcaggggagctagcagatgtgccctctgcctctgtggagctctcatcc
ggatcgttgctcagctcggttgtggcagtgttgcagttgtgcatcggtattgcagttccc
acaacccctgcctgtatctgccgacatctgattggttgtgtcagggtgcagaggtttgca
gtggacacgctcgggagtctttccaagcaggcaggaagcactgattttgttgagcaggta
ttcaacattcttctagaatacctcataaacccagacacagagtcttctgttctaaagaaa
gtcatgcaagctatcttgcaatggttttcccgccattctgatctaccagtagtgtggcat
tctctaagccaagatctgtttcctgtcctgaagaaacgcctctgtgatgtgagatgggaa
gtcagggactctgcccttgagtttctaacacagcttactttaaatttccaagggaaaaca
gagtttccaccaatcctgttgagttctgggattctgaaactccttctggatttgctgtca
gactctgagagttatgttcgggcaagtgctgttactgccctgggacagactgcctatatt
acaaacaataatgaagagactctcaactctgagagtggcacaagtgtgcaggaggacatt
gcctcacggttagttgacattttagcccaggacacagaggggttcccacggagggctgtg
gtcaaggtgtttgcagactggctaaagcagcactcccgtctgacaatacagaattttgaa
gagtctgcagccagtgtgctgaagtacgggagcaatgacttagactgggaagtaaaaatc
cacagcttggagatggctgaagtttgtatcaatcaaacactatcaaaatctagtttatca
tcttgcccttatgcagttattcaatcggaaaactccaaaaacgaaaaacttacagaatcc
cttcagaagctgtgcagccttaaaatatttgaagttctgctcgctggactgtatgactgt
gaccggcctgttgcgcagaaggcatgcacaattctaatctccttgaagcaggtcgttttg
gaagacagggaggccctagatcttaaaggactcacatgggctccagatattttaagtaaa
tgcttttcaaaacacagtaaaatggcagtctgtggagaaaccaatccaagtttacaagca
gggggcaatcttgttgagattttgtctattctggatttggagacaatgcaacaaacctta
gagaggagcagtgactacatagaaaacagtcctcgctccctcctgcaagatattctggct
gcaactgaaaccacagaggacaacgctatagactgctattaa
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