Polyodon spathula (Mississippi paddlefish): 121300595
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Entry
121300595 CDS
T07273
Name
(RefSeq) xylosyltransferase 1-like isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pspa00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
pspa01100
Metabolic pathways
Module
pspa_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121300595
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
121300595
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121300595
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
121300595
Glycosyltransferases [BR:
pspa01003
]
O-Glycan biosynthesis
Glycosaminoglycan
121300595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
121300595
NCBI-ProteinID:
XP_041085133
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All DBs
Position
26:complement(12521962..12567511)
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AA seq
947 aa
AA seq
DB search
MVGGPCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEDRENGGSNSREKRDGVGS
SRNYNLAGSEYRGDKQHHHQAPLRKGPALHKQQPDGYYSHRPKEKVRVDSNNENSVPKDF
ETIDNSNFEARSQPQKQALSKHKERLQEKTQAEERWKENALILGRNSNEVIQYGETKAAV
ILPDRNHSKTNPGVQTSHRTAKLQPSPSHISRPHHQQLRQHQGKKGADRADASPQIKYDQ
PPKCEISGKEAISALSRAKTKECRQRIAEVYCQHKERLLMPEKVTRFCPLEGKANVNLQW
DEESVEPLPPNPVRIAFVLVVHGRASRQLQRLFKAIYHADHYYYIHVDQRSNYLHRQVVA
MASHYPNVRVTPWRKSTIWGGASLLTMYLQSMKDLLDMSDWSWDFFINLSAADYPIRTND
QLVTFLSKYRDMNFLKSHGRDNARFIRKQGLDRLFFECDTHMWRLGDRKIPEGITVDGGS
DWFLLNRKFVNYVINSQDDLVTNMKRFYSYTLLPAESFFHTVLENSPHCESMVDNNLRIT
NWNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTARPTFFARKFEASVNQEIVNQLD
GFLFGSLPSNTPGLKAYWENVFDEPDGAHSLSDTKLTYYHAFARMGLQRAANSMQGDPND
SSCRYFPMGHPVSVHLYFLSDRFQGYLVRHRSTNLVTSKLETLETWVMPKKVFKIANPPS
NFGRLQFVEIGTEWDAKERIFRNFGGLTGPADEPVGMQKWGKGANVTVTVVWVDPTNVIA
ATYDILIEANAEFTHYRPPLNLPLRPGTWTVKVLHHWSPVAETRFLVAPLAFYNHQPIRQ
DDALRLHNGPAKNSYMEQSFHGLNPVLNIPVHLGQVEAAKHNAGLTGKELERWVDELVGA
HWSAVDVCSVGPSGCPVMQACSQTVWSALSPDPKAELGPIRADGHLR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcggtccgtgcgctcgcaggctggctcgccgttcacggtccgcattgatagcg
gcgctcaccgtattgcttgtgcaaacgctgatcgtttggaacttcagcagcttagactcg
ggcgaagaccgagagaacggcggctccaacagccgtgaaaagcgggacggggtcgggagc
agcagaaactataacctagccggcagtgagtaccgcggggataagcaacaccaccaccag
gctccgctaagaaagggacctgctctgcacaagcagcagccggatggctattactctcac
cggcctaaggagaaagtgcgagtggacagcaacaacgaaaactcggtgcccaaggatttt
gagaccatcgataacagcaacttcgaagcgcgctcccagccacagaagcaggcacttagc
aagcacaaggagcggcttcaagagaaaacacaggcggaggagcgctggaaagagaacgcc
ctgatcctgggtaggaactccaatgaggtaatccagtatggggagaccaaagcggcagtg
atcctgccggatcggaaccacagcaagaccaaccccggggttcagacgagccacaggaca
gccaagctgcagccgagccccagtcacatctctcgcccgcatcaccagcagctgcggcag
catcaaggcaagaagggagcggacagagccgacgcctcgccccaaatcaaatacgaccag
ccgcccaagtgcgagatcagcggcaaggaagccatctccgccctgtcccgtgccaagacc
aaggagtgtcgccagcgcatcgcagaggtttactgccagcacaaagagaggctgctcatg
cccgagaaagtcacccgcttctgtcctttagaaggtaaggcgaatgtgaacctgcagtgg
gatgaggaatccgtggagcccctgcccccaaacccagtgaggatcgcctttgtcctggtg
gtgcacggccgggcctcccgccagctgcagaggttgttcaaggccatctaccacgctgac
cactactattacatccacgtggaccagcgctcaaactatctccacagacaggtagtggcg
atggccagtcactaccccaacgtgcgggtcactccctggcgcaagtccaccatctgggga
ggagccagtctgctgaccatgtacctacagagcatgaaggacctgctggacatgagcgac
tggagctgggacttcttcatcaacctgagtgcggccgactaccccatcaggacaaatgat
cagctagtgaccttcctttccaagtatagggacatgaatttcctcaagtcacatggcaga
gacaatgctaggtttatccggaagcaggggctggatcgtctcttcttcgagtgtgacacc
cacatgtggcgactcggggaccgcaagattccggagggcatcaccgtagacggcggctct
gactggttcctgctcaacaggaagtttgtgaactacgtcatcaactcccaggatgacctg
gtgaccaacatgaagcgcttctactcctacactctgctccccgccgagtccttcttccac
acggtgctggagaacagtcctcactgtgagagcatggtggacaacaacctgcgcatcacc
aactggaaccgcaagctgggttgcaagtgccagtataagcacatcgtggactggtgcggc
tgctctcccaacgacttcaaacctgcagacttccatcgcttccagcagactgctcggccc
acgttcttcgcccggaagttcgaggcgagtgtgaaccaggagatcgtgaatcagctggat
gggttcctgttcggcagcctgccctccaacaccccaggcctcaaggcatactgggagaat
gtctttgacgagcctgacggggcccacagcctctccgacaccaagctcacctactaccac
gcctttgcacgcatggggctgcagagagccgccaactccatgcagggtgaccccaatgac
agcagctgcaggtatttcccgatgggacaccccgtgtcagtccacctgtacttcctgtca
gaccgtttccaaggttacctagtgaggcaccgctccaccaacctggtgaccagcaaactg
gagacgctggagacctgggtgatgcccaagaaagtgttcaagatcgctaatccacctagc
aactttgggaggctgcagtttgttgagattggcacggagtgggatgccaaagagcgtatt
ttccggaatttcggggggctgactggcccagcggacgagcctgtggggatgcagaagtgg
gggaagggggccaacgtgactgtgacggtggtctgggtggatcccaccaacgtgatcgca
gccacctacgacatcttgattgaggcgaacgcagagttcacgcactaccggccacctctc
aacctgccactgcggcccggcacctggactgtcaaggtgcttcaccactggagcccggtc
gcggagacgcgattcctcgtcgccccgctcgccttctacaaccaccagcccatcagacaa
gatgatgctttgaggctgcacaacggaccagccaagaacagctacatggagcagagcttc
cacgggctcaacccggtgctgaacatcccagtgcacctggggcaggtggaggctgccaag
cacaatgcagggctgaccggcaaagagctggagcgctgggtggacgagctggtgggggca
cactggtctgcagtggacgtgtgctctgtggggcccagcggctgtccggtcatgcaggcc
tgcagccagaccgtatggagcgcgctcagccccgaccccaaagctgagcttgggccaatc
agagcagatggtcacctcaggtag
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