Polyodon spathula (Mississippi paddlefish): 121300598
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Entry
121300598 CDS
T07273
Symbol
slc1a6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121300598 (slc1a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121300598 (slc1a6)
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
121300598 (slc1a6)
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Motif
Pfam:
SDF
Pex24p
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
121300598
NCBI-ProteinID:
XP_041085138
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Position
26:complement(18808186..18820718)
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AA seq
562 aa
AA seq
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MNESQTHSNSHFLDEDAGKCRISESGVQRFQKAMQKQASRAQKRMSSVTRESVRNFLKRN
AFVLLTVAAVVLGVALGFGLRRYDMSLREIKYFSFPGELLMRMLKMLVLPLIVSSLVTGM
SSLDSRASGKMGMQAIVYYMVTTFIAVFIGIIMVMIIRPGGGHRDSPVPTENKTEQIQAV
DAFLDLIRNMFPPNLVEACFKQYKTQYTKRLVKRNVTTAANFTDDTNATESSVLANISQA
IQTLQETITMEEAVPGPGSSNGVNALGLVAFSMCFGLVIGKMKQKGQALLEFFDCLNEAI
MRLVAIIIWYAPVGIMFLISGKVLEMKDLAQMGGQLGMYTVTVIVGLLIHALFVLPLLYF
IVTRKNPYLFIGGLLQALITALGTSSSSATLPITFRCLEENNKVDKRVTRFVLPVGATIN
MDGTALYEAVAAIFIAQVNHMELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSV
GLPTEDITLILAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRQELQTQDTEISNSVIEENE
KPYQLICQDNDTQKHRNSDTMM
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagagtcagacccactccaacagccatttcctagacgaagacgcaggcaagtgc
cggatctccgagagtggcgtgcagcgcttccagaaagccatgcagaagcaggcgagccga
gctcagaagaggatgagctccgtcacgagagagagcgtcaggaacttcctcaagaggaac
gcctttgtgctcctcactgtggcggccgtggtgctgggtgtggcgttaggcttcggtctg
cgccggtacgacatgtccctaagggagattaagtatttctccttccccggagagctgctc
atgaggatgctgaaaatgctggtcctgcctctcattgtttccagccttgtgaccgggatg
tcttctctagatagcagggcgtcggggaagatgggcatgcaagccatagtttactacatg
gtgaccaccttcattgccgtgttcattggcatcatcatggtgatgattatccggcctgga
ggggggcacagggacagccctgtcccgacagagaacaagacagagcagatccaagctgtg
gacgccttcctggacctcattcggaatatgttccctccaaacctggtggaagcttgtttc
aaacagtacaagacccagtataccaagaggcttgtcaagaggaacgtcacgacagcagca
aatttcaccgatgacacaaacgccactgagtcgtccgtcctggctaatatcagccaggcc
atccagaccctgcaggagaccatcacaatggaggaggcggtgcctgggccaggctcctcc
aatggggtgaatgcgctggggctggtggcgttctccatgtgcttcggcctggtaattggg
aaaatgaaacagaaaggccaggcactgctggagttctttgattgtctcaatgaggctatt
atgagactggtggcaatcatcatatggtacgctcctgtagggatcatgttcctgatctct
gggaaggtcctggagatgaaggatttggctcagatgggcggacagctggggatgtacact
gtcacggtgatcgtggggctgctgatccacgccttgtttgtgcttccactgctctacttc
atcgtcacgcgcaagaacccctacctgttcatcggggggctactgcaagcactcatcacc
gccctggggacatcatcaagctcagcaacgctccccatcactttccggtgcctggaggag
aataacaaagtggacaagcgcgtgacgaggttcgtcctgcccgtgggcgcaaccatcaac
atggacggcaccgcgctctatgaggccgtggccgccatcttcatcgctcaggtcaatcac
atggagcttaacttcggacagatcataaccatcagtatcacggcaacagcagccagcatt
ggggctgcggggatccctcaagctggtctggtaaccatggtgatcgtattgacatcggtg
ggactgcctactgaggacatcaccctaatcctcgcggtggattggttcctggaccgcctg
aggaccaccactaacgtcctgggggactcgctcggcgccggcatcgtggagcacctctcc
cggcaagaactgcagacccaggacaccgagatcagcaactcggtcatcgaggagaatgag
aagccttatcagctgatctgccaggacaacgacacccagaaacaccgcaacagcgatacc
atgatgtga
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