Polyodon spathula (Mississippi paddlefish): 121300645
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Entry
121300645 CDS
T07273
Name
(RefSeq) spliceosome-associated protein CWC27 homolog
KO
K12737
peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:
5.2.1.8
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121300645
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121300645
Enzymes [BR:
pspa01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
121300645
Spliceosome [BR:
pspa03041
]
Complex C
Other components
PPlases
121300645
Chaperones and folding catalysts [BR:
pspa03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
121300645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
121300645
NCBI-ProteinID:
XP_041085218
LinkDB
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Position
2:complement(75529722..75618311)
Genome browser
AA seq
481 aa
AA seq
DB search
MSNIYIQEPPTNGKVLLKTSAGDIDIELWSKEAPKACRNFVQLCMEGYYDSTVFHRVVPE
FIVQGGDPTGTGTGGESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRA
DELNNKHTIFGKVTGDTVYNMLRLAEVETDKDERPLNAHKVRSTEVLHSPFDDIVPRAIQ
NIKKEKEKDDGKKFQSKATKNFSLLSFGEEAEEEEVEVNKVSQSMKGRSKSSHDLLKGDP
RLSSVPAVDRGQTSKRQRGDSFEGKEEEEEEEEGADDSDCNTEERQQMKDRISKKLKKDK
NIDVKQQPGEKEERDKKTSRSDELRKEARQLKKELLAAKQRKEESCEKEVEKEIENEEKA
PNVAVAEYLEQRKKYDELRKQKKKKGTTREQQTLALLEQFKSKLSSAITVTPEEDVEELA
AEDDDKGWMSHVLQFDEQSRKVKDATMQDEDTFEIHDPRNPVNKRRREESKKIMREKKER
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacatttatatacaagaacccccaacgaatggaaaggtattgttaaagacatcg
gcaggtgatattgatattgaactgtggtccaaagaggccccaaaagcatgcagaaatttt
gttcagctttgcatggaagggtactatgacagtacagtattccaccgtgttgtcccagaa
tttatcgtgcagggaggggatcccactggaacaggaactggaggagaatccatctatggg
cgcccctttaaggatgaattccattccaggctgcgtttcaacagaagaggactggttgct
atggcaaacgctggaccccatgataatggcagccagtttttctttacattgggtcgtgca
gatgagcttaataacaaacacactatatttggaaaggttacaggagatacagtgtacaat
atgttgcgattagcagaagtggaaacggataaagatgaaagaccacttaatgcacacaaa
gtacgatctactgaggtgttgcacagtccctttgatgacatagttccacgggcaatacaa
aacattaaaaaggaaaaagaaaaggacgacggaaagaaatttcagtccaaagccacaaaa
aatttcagtttgctttctttcggagaagaagcagaagaggaagaagtagaagtaaataaa
gtcagccagagtatgaaaggaagaagcaagagcagccacgatttactgaaaggtgaccca
agattgagttcagttcctgctgtagaccggggacaaacatctaaaagacaaagaggggat
tcgtttgagggtaaggaggaggaggaggaggaagaggaaggtgcagacgacagtgattgc
aacacagaggaaaggcagcaaatgaaagacaggatctcaaagaaactgaaaaaagataaa
aacatagatgtcaaacagcagcctggagagaaagaggaaagggataagaaaaccagccgt
agcgatgaactgcgtaaagaggcacgtcaactgaaaaaagaacttcttgcagccaaacag
aggaaagaagaatcttgtgaaaaggaagtggaaaaggaaatagaaaatgaagagaaggcc
cctaatgttgcagtggcagaatatttagaacaaaggaagaagtatgatgaactaaggaag
cagaaaaagaagaaagggacaaccagagagcaacagacgctggctcttcttgaacagttt
aaatccaaactgtccagtgccatcacagtaactccagaggaagatgttgaggaattagca
gcagaagatgatgataagggatggatgtcccatgtccttcagtttgacgagcaaagcaga
aaagttaaggatgcaaccatgcaagatgaagacacatttgaaatccacgacccacgcaac
cctgtaaacaagaggcgaagagaagaaagcaaaaagataatgagagagaaaaaagaaaga
cggtga
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