Polyodon spathula (Mississippi paddlefish): 121300667
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Entry
121300667 CDS
T07273
Name
(RefSeq) rhomboid-related protein 1-like isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121300667
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
121300667
Peptidases and inhibitors [BR:
pspa01002
]
Serine peptidases
Family S54: Rhomboid family
121300667
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
121300667
NCBI-ProteinID:
XP_041085259
LinkDB
All DBs
Position
26:complement(15584507..15605839)
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AA seq
284 aa
AA seq
DB search
MDRSSLFQLIQEQLDPENTGFIAVENISSLLEHHELQLDPSKLEMLFALVQSNEEGQVCY
QELLELMSSKRSSSFRRAIANGRRSLQREILLDETGLGLYKRFVRYVAYEILPCETDRRW
YFHQNRFCPPPIFMAIITVIQIIVFLCYGAMLNKWVLQTYQLDFMKSPLVYHPGHRAQVW
RFFTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVLAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagttccctgtttcagctcatacaagagcagctcgacccagagaacaccgga
ttcatcgcagtggagaacatcagcagcctgctggagcaccatgagctgcagctggacccg
tccaaactggagatgctgttcgcgctggtgcagagcaacgaggagggccaggtgtgctac
caagagctcctcgagctgatgagcagtaaacgctccagcagtttccgccgggcgatcgcc
aacgggcggcgctcgctgcagagggagatcctattggacgagacggggctggggctctac
aagcgctttgtgcgctacgtggcgtacgagatcctgccgtgcgagacggaccgccgctgg
tacttccaccagaaccgattctgcccgccccccatcttcatggcgatcatcacggtcata
cagattattgtattcctctgctatggtgcaatgctaaataagtgggtcctgcaaacctac
cagctggacttcatgaagagccccctggtgtatcacccagggcaccgggcgcaggtctgg
aggttcttcacatacatgttcatgcatgtcgggctggagcaactggggttcaacgccctc
ctgcagctgatgatcggagtgcctcttgagatggttcacggcatcctccgtatcagcctc
ctgtacatggcaggggtgctggcgggctccctgacggtctccatcactgacatgagagcc
cccgtggtgggggggtccggcggggtctacgcactctgctcagctcatctcgccaatgtc
gtcatgaactgggctgggatgcgctgtccttacaaactgctcaggatgatcctggctctc
gtctgcagtaagtag
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