KEGG   Polyodon spathula (Mississippi paddlefish): 121300710
Entry
121300710         CDS       T07273                                 
Name
(RefSeq) lysine-specific demethylase 4B-like isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pspa03036]
    121300710
Enzymes [BR:pspa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     121300710
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     121300710
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121300710
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 PHD Tudor_3
Other DBs
NCBI-GeneID: 121300710
NCBI-ProteinID: XP_041085362
LinkDB
Position
26:19198599..19273539
AA seq 1085 aa
MGSEIPSPNAQNPGCKIMTFRPTMEEFRDFEKYIAYIESQGAHRAGLAKVIPPKEWRPRQ
SYESIDEMVIPAPIVQVVTGQSGLFTQYNIQKKPVTVGEYRKLANSDKYCPPRHQDFEDL
ERKYWKNLTFVSPIYGADISGSLYDKGIREWNISKLNTLLDMVEQECGIVIEGVNTPYLY
FGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAVPPEHGKRLERLAKGFFPGSSQGCDAF
LRHKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWI
DYGKMATQCTCRKDMVKISMDVFVKCLQPERYEQWKQGKDVAALDHQKPTALSCPELEVW
RERRAKRLRRAKRKRREARRKKLEEAKLLAEGGLATAEDSAVEMKTEIEEQKSKAAECGE
APLEDEKKKKKKRKKKKEGEAQGGGLLSDVVGPPVAAGSVNVASPIQAVSPDQEEDFKPR
PIIPMLYVVPRTKKVVFDKEHMSCQEAFEQFAKRKVARAIPHPEEGGMKKEALEDTEAPA
LEGRGIQNKVVLVLSKHRIMSPPPHSKAKTKMEVKKSRRHPFSKPPMRSPISVVKQETFS
DEEWLSSLAGEEDPSDPESVRTVLSHLWQNKSHNFLAERRFNAAGALIEPYCAICTLFYP
YEQRILSCIPPPPPQPEKDQSVSVDSLTIPMSKCGTRTKPLIPEMCFTSGGENTEPLPSS
SSIGEDGTSLLISCSKCCLQVHASCYGTRTDLVKDGWTCSRCTACAWTVDCCLCNLRGGA
LQMTVDKRWVHVICAIAVPEARFVNVIERNPVDISAIPEQRKKLKCVYCHKKTKRVIGAC
IQCSFKHCSTSFHVTCAHTAGVLMEPDDWPYVVSITCHKHKATNQNLSQAPKEVSLGQTV
IGKNRNGLYYTCRVIGTATQTTYEVNFEDGSYIDNLHPENVLSRDCLQYGPPAEGEVIQI
QWTDGSVFSARFITAHFSNVCQVEFEDGSQLTVKRSDIHTVDEELPKKVKSRLSLTTGAL
REAVFSGDEVQAAKRPRVPSPAPSPAPSPSPAPAEDYSNYVTFMESLLQAQYQQQNQQGS
SHCMF
NT seq 3258 nt   +upstreamnt  +downstreamnt
atgggctcggagatccccagtcccaacgcccagaatccaggctgcaagatcatgacgttc
cggcccaccatggaggaattccgggatttcgagaaatacatagcgtacatcgagtcccag
ggagcacacagagcagggctggccaaggtaatccctcccaaggagtggaggccgcggcag
tcatacgagtcgatcgatgagatggtgatcccggcgcccatcgtgcaggtggtgacgggt
cagtctgggctcttcacacagtacaacatccagaagaagcctgtgactgtgggggagtac
cgcaagctggctaacagtgacaagtattgcccccctcggcaccaggactttgaggatctg
gagaggaaatactggaagaacctgacttttgtgtccccgatctatggagctgatatcagc
ggatctctgtacgacaaaggcattcgggagtggaacatcagcaagctgaacacgctgctg
gacatggtggagcaggagtgcggcatcgtgatcgagggagtcaacaccccctacctgtac
ttcggaatgtggaagaccaccttcgcctggcacactgaggacatggatctgtacagcatc
aactacctgcacttcggagagcccaagtcctggtatgcagtaccaccagagcatggcaag
agactggagcgcttggcaaaagggtttttcccgggaagttcccagggatgtgacgccttc
ttgcggcacaagatgacgctgatctcaccctccatactgaagaagtacgggattcctttt
gatcggatcacacaggaggctggtgagttcatgatcacctttccctacgggtaccacgct
ggctttaaccacggcttcaactgcgctgagtccaccaacttcgccacgctgcgctggatc
gactacggcaagatggccacgcagtgcacgtgcagaaaggacatggtaaagatctccatg
gacgtgtttgtgaagtgcctgcagcccgaacgctatgagcagtggaagcagggcaaggac
gtcgctgccctggaccaccagaaacccaccgccctcagctgccctgagctggaggtctgg
agggagaggagagctaagaggttacgcagggctaagaggaagaggagagaggctcgcagg
aagaagctggaggaagccaagctgctggcagaggggggcttggccaccgcagaggactct
gctgtcgagatgaagaccgagatcgaggaacaaaagagcaaagcggcagagtgtggagag
gcacctctagaggacgagaagaagaaaaagaagaaaaggaagaagaaaaaggaaggggag
gcgcaagggggcgggttgctgtcggatgttgtcggtcctccagtagcggcaggatctgtc
aacgtggcctccccaatccaggcagtgtcccccgatcaagaggaagacttcaaaccccga
cccatcatccccatgctgtacgttgttccccgcacgaagaaggtcgtcttcgacaaggag
cacatgtcctgccaggaggccttcgagcagtttgccaagcgcaaggtggcccgagccata
ccccaccctgaggaggggggcatgaagaaggaggcacttgaagataccgaggcaccagcc
ttagagggcaggggcatccagaataaagtggttctagttttaagcaagcacagaatcatg
tctccacccccccactcgaaagcgaagacgaagatggaggtgaagaagagccggcggcac
ccgttcagtaagccccccatgcgctctccgatctccgttgtgaagcaggaaactttcagc
gacgaggaatggttgtcttcgttggcgggagaggaggacccaagcgaccccgagtctgtg
aggactgtgctgtctcatctctggcagaataaatcccacaacttcctggctgagcggcgg
ttcaacgcagctggagcactcattgagccttactgcgccatctgtactctcttctaccct
tacgaacagagaattctttcttgtattccccccccacccccccagccggagaaagaccag
tctgtatcggtggacagcttgaccatcccaatgtccaagtgcggcacgaggaccaagccg
ctgatcccagaaatgtgcttcacctctggtggtgagaacacagagcccctgccttccagc
tcctccatcggggaggacggcaccagcctgctcatctcctgctccaagtgctgcctgcaa
gtccatgccagttgttatggaacccggactgacctggtgaaagatggctggacctgttct
cgctgcacggcttgtgcctggacagtggattgctgtttgtgtaatttaagaggcggtgcg
cttcagatgacagtcgacaagaggtgggtccatgtgatctgtgcaatagcggttccagag
gcccgctttgtgaacgtgatcgagaggaacccagtggacatcagtgccatcccagagcag
aggaagaaactgaaatgtgtctactgccataaaaagacgaagcgtgtgattggtgcctgc
atacagtgttccttcaagcattgctccacctccttccatgtgacctgcgcccatactgcc
ggggtcctcatggagccagacgattggccctacgtggtgtccatcacctgccacaagcac
aaggcaaccaatcagaacctgagccaggccccgaaggaggtctcgttagggcagactgtc
attggcaagaaccgaaatggcttgtactacacgtgccgggtgattgggacagccacgcag
accacctacgaggtcaactttgaggacggctcctacatcgacaacctgcaccctgaaaac
gtcctcagtcgagactgcctccagtacggacccccggctgagggagaggtcattcaaatc
cagtggaccgatggcagtgtcttcagtgccaggttcatcactgcccacttcagcaacgtc
tgtcaggtggagtttgaagacggatctcagctgacagtgaagcgcagtgatattcacact
gtcgatgaggagctgccgaagaaggttaaatcccggctgtctctgacgaccggagccctt
cgggaagctgttttctctggggacgaggtgcaggcagccaagcgaccccgtgtccccagc
cccgcccccagccctgcccccagtcccagccccgccccagcggaggactactcaaactat
gtgactttcatggagtcactgcttcaagcacaataccaacagcagaatcaacaggggagc
agccactgcatgttttaa

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