Polyodon spathula (Mississippi paddlefish): 121300736
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Entry
121300736 CDS
T07273
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121300736 (vps35l)
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Others
Retriever complex
121300736 (vps35l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
SR-25
Motif
Other DBs
NCBI-GeneID:
121300736
NCBI-ProteinID:
XP_041085438
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All DBs
Position
26:13860684..13873910
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AA seq
965 aa
AA seq
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MASVQWHSRFRRYQSELESCRLEQVPVEFGEYHPLKPITVTDSKTRRAGRKGSSSSSSSS
SSSAPDPLSSFLDGTDPLSLFAAAVTDPLSSGSNAAAGEPGRKRRDKEEEVSVGSDFEPW
AGKRSEILARFTTTEKLSINLFMGSDKGKAPSPGSAVSEKVRTRLEELDDLEEGSQKELL
NLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLITDI
LDTFGRLVYERIWSMCADSRPLPDSFSSDDVNDTAKETCLNWFFKIASIRELVPRLYVEA
AILKCNRFLSKSGIQETLPRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPQLKDCLNKNF
FDLLTTFKQIHGDSVQNQLVLQRVEIPVYLTLYSPAIDWILQCVAYRAPEALLTEMMERC
KKLGNNALLLNSVMSAFRSEFIAARAMDFIAMIKECDEAGFPKHLLFGSLGRNLACADPP
ESDRLTILNEAWKVVTKLRGPQDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDRT
FEEAYPQLQSVIQKILMYFHDFSVLFSVDRFLPFLDMFQKDSVRVEVCRAIMEVFIRYQQ
EPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSFGRDFEQQLSFCV
EARATFCNLEPVLVQLIHTVNQLAMETRRVMRGTHSRKTAAFVRACAAYSFITIPSLTGI
FNRLNLYLHSGQVALANQCLSQADAFLKATISLLPEVPRFVSVEGKLRPSEGFLMEFLQN
FLSTLLVVPDHPEQGVLYLVRGLLNVVQDYTWEDNSDAKVRVYTSALTLLAAMSQESYLY
HIPRVDSNETLYGGDPKFVTEINKLCETLIGQILDHLKTLGKEETLRRQSSLALSLFNVL
LAHGDLRNNRLNQLAVNLWTLGQKHGYADTRSTVRLLEFIKQQSRQPDMNHLAELALRLP
MQSRT
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgtgcagtggcactcccggttccgccgttaccagtctgagctggagtcctgc
cgactggagcaggtgccagtggagtttggggagtaccacccactcaagcccatcactgtg
acagactccaagacgaggcgggcggggcggaagggaagctcctcctcttcctcctcgtcc
tctagctccgcccctgacccactcagctcttttctggatgggactgacccgctgtctctc
ttcgctgcagccgtgactgaccctctgagctcaggatccaacgctgccgctggggagcct
ggcaggaagaggcgggacaaggaggaggaagtcagtgtgggcagtgattttgaaccctgg
gccggcaagcgcagtgaaatcttagcaagattcaccaccactgagaagctgtccattaat
ctgttcatgggctcagacaaaggcaaagctcccagcccgggctccgcagtgtccgagaag
gtgaggactcgcctggaagagctagatgacctggaggagggttctcagaaggagctgctc
aacctctcccagcaggactatgtgaaccgcatcgaggagctcaaccagtctctcaaagag
gcctgggcttcggaccagaaggtcaaggccctcaagattgttatccagtgctccaagctg
ctgtcggacacagcggtcatccagttctacccaagcaagtttgtcctcatcacagacatt
ctcgacacctttgggcggctggtatacgagcggatctggtccatgtgtgcagacagccga
ccccttccagactccttctcgtcggatgatgtgaatgacacggccaaagagacgtgtctc
aactggttcttcaagatcgcctccatccgagagctcgttcctcggctatacgtggaggct
gccatcctgaagtgtaatcgcttcctgtcaaaatcgggcatccaggagacactgcctcgc
ctcactgccatgatccgaggaataggggaccccctagtggctgtgtacgcccgagcctac
ctctgcagggttggaatggaggtggctcctcaactgaaagactgcctgaacaagaacttt
tttgaccttttgacgaccttcaagcagatccatggagattcggttcagaatcagctggtg
ttgcagcgtgttgagatcccagtctacctgaccctgtactctcctgctatcgactggatc
ttgcagtgtgtggcctaccgggctccagaggctctactaacagagatgatggagaggtgt
aagaagctgggaaacaacgccctgctcctgaactcggtgatgtctgcattccgctctgag
ttcattgcggctcgagccatggacttcatcgcaatgatcaaggagtgcgacgaagccggc
ttccccaagcatctgctgtttggttctctgggtcggaacctggcctgcgctgacccccct
gaaagtgaccgcttaaccatcctgaacgaggcctggaaggtcgtcaccaagctgcgcggt
ccgcaggattacatcaactgtgctgagatctgggtggaattcacctgccgccacttcact
aagcgagaggtgaacacggtgctggctgacatcatcaaacacatgaccccagaccgaacc
ttcgaagaggcctacccacagctgcagtctgtgatccagaagatcctgatgtacttccac
gacttctctgtgctgttctcagtggaccggttcctgcccttccttgacatgttccagaag
gacagcgtacgggtcgaggtgtgccgggccatcatggaggttttcatcaggtatcagcag
gagcccacgagagacccagtgatcctcaacgcgctgctgcacgtgtgcaagaccatgcac
gactctgtcaatgccctaaccctggaagatgagaagaggtcactggcactcctaataaac
ggtttcatcagaatggtgtcgtttggtcgggactttgagcagcagctgagtttctgcgtg
gaagctcgagccaccttctgtaacctggagccagtcctggtgcagctcatccatacggtg
aaccagctggcgatggagactcgcagggtgatgagagggacgcactcccgaaagactgca
gccttcgtacgggcctgcgccgcctacagcttcatcaccatcccctccctgactggcatc
ttcaaccggctcaatctgtacctgcactctggccaggttgcactggccaaccagtgtctt
tcccaggctgatgctttcctgaaggcgaccatcagtctgcttcctgaggtcccgcgattt
gtcagtgtggagggaaagctccgcccctccgagggattcctgatggaattcctgcagaac
ttcctgtccaccctcctggtggtgccggatcacccggaacagggagtgctgtacctggtg
cgcgggctcctcaatgtggtccaggattatacctgggaggacaacagcgacgccaaagtg
cgagtgtacaccagcgccctgaccctactggcagccatgagccaggagagctacctatac
cacatccccagagtggattccaatgagacgctgtacgggggggaccccaagtttgtaacg
gagatcaacaagctgtgcgagaccctgattggacagatcttggaccacctaaaaacgctg
gggaaagaggagacgctgcgcaggcagagctccctcgctctctcactcttcaatgttctg
ctggctcacggggaccttcgcaacaatcgtctcaaccagctggcagtgaacctgtggacc
ctgggccagaagcacggctacgcggacacacgctccacggtgcgcttgctggagttcatc
aagcaacagagccggcagcctgacatgaaccacctggcagagctggctctgcggctcccc
atgcagtccaggacctga
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