Polyodon spathula (Mississippi paddlefish): 121300795
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Entry
121300795 CDS
T07273
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121300795
04020 Calcium signaling pathway
121300795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121300795
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121300795
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121300795
NCBI-ProteinID:
XP_041085605
LinkDB
All DBs
Position
26:9362535..9437758
Genome browser
AA seq
2326 aa
AA seq
DB search
MLVILLNCATLGMFQPCEDVKCQSEWCTILQAFDDFIFAFFAVEMVIKMIALGIFGQKCY
LGDTWNRLDFFIVMAGMLEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLEDNFKTTYNLSFLTPYYKQEEGEE
TPFICSTNRDNGMVRCPDIPRLKENRVECSLSMFYDSHPHNSMDVGNGCINWNQYYNVCK
TGDLNPHKGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSF
FMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTLASYSEPGSCYEELLKYISHLY
RKVKRRVGRLYSNWQNKRRKKVNPNSSISGGSIKRQGRRCRNKRRIRSIHHLIHHHHHHH
HHHYHISNGSPRALRGNSEICDVMEMRSMRPGSRLMLQSPSPNLQSPSPGTESVHSIYHS
DCYFQGSQVRCKSYNAAGNVKHINGINGGMNYPTIVSSMSSSRSSTMPKSKGKRNSNHPM
SLSKEAGNISIPDPYGKMHQFVGEHGVYQTTSRLSGLNMPCSVTSNQPSLLSCELTKCPY
CTSILDNPELDLSDSDSGDSDVVYEFTQDLRHGIERRNCQSRRKNKPKEKNKLAQCWDLF
CQKLKTIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTDALEISNIVFTSMFALEMLL
KLLAFGLFGYIKNPYNIFDGIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFLPALR
RQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLTTENGDTIPDRKNFDSLLW
AIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEG
DANRSDTDEDKMSTNFDDEDKCRDLHSSELKMYSLMMTPNGHVDSRASIAPPIIMRTAAT
PMPTPKSSPFMDSVHTLNESRRASSSSIDPNAYDQRSLSSTRSSPCAPWGSASNWGSRRS
SWNSLSRPPSLKRKNLSGEHESLLSGEGRGSYEDEDSDGDKSSKAGSVSGASLQHRAESL
DARGSLDLPELLQIPMLRHHSMVEHQDCNGKALHIPHEFFLRVDNHKDEPSDYDEDIDDS
YCFRIRKMLEPYKPEWCKDHEDWSLYLFSPQNQFRVMCQKVISHKIFDHVVLVFIFLNCI
TIALERPDIQPHSTERVFLSVSNHIFTAIFVTETTVKVVALGFFSGENTYLQSSWNILDG
VLVFVSVIDIIVSLASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRP
IGNIVLICCAFFIIFGILGVQLFKGKFYYCDGFDTKNITNKSDCLQTNYRWVRRKYNFDN
LGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVRNHNPWMLLFFISFLLIVSFFVLNM
FVGVVVENFHKCRQHQEAEEARLREEKRLRRLEKKRRKAQRRPYYANYSPARLYIHTLCT
SHYLDLFITFIIGINVVTMSMEHYHQPKSLDEALKYCNYVFTIVFVFEAILKLVAFGFRR
FFKDRWNQLDLSIVLLSIMGITLEEIEMNASLPINPTIIRIMRVLRIARVLKLLKMATGM
RALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLICNDENPCEGLSRHATFENFG
MAFLTLFRVSTGDNWNGIMKDTLRECSSEDKHCLSYLPLFSPVYFVTFVLIAQFVLVNVV
VAVLMKHLEESNKEAKEDAEMDAEIEMEISRRLSASAGGRPLGPDSRASYVGPRPDSPVQ
DGVRCGRPGQEAGQENLLSVRKVSVSRMHSLPNDSYMFRPVKSANTPYPLTEVESFDGEL
QSGSMISMQFPEAELDSLLRVPVTTVHSNSASPLHEKSSLPKIPAQQIASRSPSINRLLQ
RQEAIKHDSFDTQSDDLRDNLHGQSSDSLQFKVPVQSSLTLPLLRPMAVSAHSTPQLSPL
LPPRSRTSSVHTHRLVYSQHSIPSRPSSQTSSTSPVSSMFDSVDPTDEEVQHINSSAKDW
SRQSEARSHSLSPFISPAQSPVPLKNCCSVTSLAGANMKDKDLKKFYSVDTEGFLAKPSW
TDDPRRHSIEICPSIDDGDSVYDQSLDDKRRSSLHGQLESPYTPGTRRKKKMSPPCISID
PPLENENSAPAASLTKVSENSMLLRRRTPSCESTLYRDSLDLLEAQPTADQPSKSEKRIS
ISCRNEHLSIPQFSFDQSDVGSMSSLSDILSDSDQSTPSSSISFDSKNETGVASELQKPD
NLKVQHTDNPETSSKGSLSVTRSPLRKHGLVRMVSTRDEDTDDSVL
NT seq
6981 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtaatcctcctgaactgcgcaactttggggatgttccagccctgtgaagatgtc
aagtgtcagtctgagtggtgcaccatccttcaggcatttgatgactttatttttgcattc
tttgctgttgagatggtcatcaagatgattgccctggggatttttggacagaaatgttac
ctgggagacacgtggaaccgtctggatttcttcattgtcatggcagggatgctggagtac
tcactggatgggcacaacgtcagcttgtctgctattcgtactgtgcgggttctcaggcct
ctcagagccattaacagagttcctagtatgagaatactggtgaccctgctgttagatact
ctgcctatgctaggcaacgtccttctcctttgtttttttgtcttctttatatttgggatt
gttggagtgcaattgtgggctggcctgctgaggaataggtgtttcttagaagacaatttt
aaaacgacttacaatctatctttcttaaccccgtattacaaacaagaggagggtgaagaa
accccattcatctgctccaccaatagggacaacgggatggttaggtgtccggacatcccg
cgcttgaaggaaaatagggtggagtgttctctcagcatgttctatgacagccacccacac
aacagtatggacgttggaaatggctgcataaactggaaccaatattacaatgtatgcaag
actggagacctgaacccacacaaaggagctattaactttgacaatattggatatgcctgg
atcgctatttttcaggtcataactttggaaggttgggtggatatcatgtattatgttatg
gatgcacattctttttacaattttatatattttatattacttataatcgtgggctcgttc
tttatgattaacctgtgcctggttgtgattgcaacccagttctcagagacaaagcagcgt
gaaaaccagctcatgcaggagcagcgcgcccgctatctctccaacgacagcacactggcc
agctactcggagccaggcagctgctacgaggagctgctcaagtacatcagccatctctat
cgcaaggtgaagcgtcgagtcgggaggctgtacagcaactggcagaacaagaggaggaag
aaagtcaaccccaacagtagcatcagtggtggcagtattaagagacagggcagaaggtgt
agaaacaagcgtcgaatccgatcaatccaccacctgattcaccatcaccaccaccaccac
caccatcactaccacatcagcaacggcagtccccgtgccctcagggggaactctgagatc
tgtgatgtcatggagatgagatccatgagacctgggagtcggttaatgcttcagtcgccc
tcccccaatcttcaaagcccctcacccggcacagagtcagttcacagcatctatcactct
gactgctatttccaagggtcacaggtcagatgcaagtcttacaatgcagcagggaatgtt
aaacacatcaacgggattaacggaggcatgaactaccccaccatcgtctcctccatgtcc
agtagtaggtccagcacaatgccaaaatccaaggggaaaagaaacagcaatcaccccatg
agtctaagcaaggaagcaggtaatatcagcatcccagatccctatgggaagatgcaccag
tttgtgggagagcatggtgtgtatcagactaccagccgcctctctggcctcaatatgcct
tgttcagttaccagcaatcagcccagcctgctatcctgtgagctgaccaaatgcccctac
tgtacaagcatactggacaaccctgagttagatctcagtgactctgacagcggcgactcc
gacgtggtttatgagttcacacaggacctgaggcatggcatagagcgcaggaactgccag
tccaggagaaaaaataaaccaaaggaaaaaaacaagcttgcacaatgctgggatttgttc
tgccagaaactgaaaacgattgtggaaagtaaatactttaaccgtgggattatgatagca
atcctgatcaacactttgagcatggggatagagtaccatgagcagccagatgagttgaca
gatgccctggagataagtaacattgtcttcaccagcatgttcgccctggaaatgctgctg
aagctcctggcattcggcctctttggatacattaagaacccctacaacatcttcgatggg
atcattgttattatcagtgtgtgggagattattggacagtcagatggaggcctctcggtc
ctcaggactttccggctgctccgggtcctcaaactggtgcgtttcttgccagcgctgaga
cgacagctcgtcgttctgatgaagaccatggataacgtggctactttctgcatgctgctc
atgctcttcatcttcattttcagcattcttggaatgcatctttttggatgcaagttcagt
ctgacaacagaaaatggagacacgattccagacagaaagaattttgattccttgctgtgg
gcaatcgtcactgtgtttcagatccttacccaagaagactggaatgtggtcctctataat
ggaatggcatccacttccccctgggctgccttgtactttgtggctttgatgacttttgga
aattatgtgctgtttaacctactggtcgctattctggtggaagggtttcaagcagagggg
gatgcaaaccgttctgacacagacgaagataaaatgtcaacaaactttgatgacgaggac
aaatgcagggacttgcattcatcagaattgaagatgtactctttgatgatgacccctaac
ggacatgtggactcacgtgcaagcatagcccctcccatcatcatgcgcactgctgccaca
cccatgccaacgcccaagagctcgccattcatggattcagtccacaccctcaatgagtca
agacgggccagcagctcctccatcgaccccaacgcttacgaccagaggtccctgtccagc
acccgcagctccccgtgtgccccctggggttcggccagtaactggggcagccggcggtct
agctggaacagtctgagccggcctcccagcctcaagcggaagaacctttctggggaacac
gagtctctgctgtccggggaaggtcggggcagctacgaggacgaggattcggatggtgac
aagtccagtaaagctggcagtgtcagtggagcatctctgcagcaccgtgcggagtcattg
gatgcccgaggctctctcgatctgcctgagctcctgcagatccccatgctgcgccaccac
agcatggtcgagcaccaagactgcaacggcaaggccctccacatccctcacgagttcttc
cttcgcgtcgacaaccacaaggatgagcccagtgactacgatgaggacattgacgatagt
tactgcttcaggatcaggaagatgcttgagccgtacaaacccgaatggtgtaaagatcac
gaggactggtctctttatttgttttctccacagaaccagtttcgcgtgatgtgtcagaag
gttatttcccacaagatctttgaccatgtggttcttgttttcatcttcctcaattgtatc
accattgcgctggagagacctgatattcaacctcacagcacagagagagtgtttctgagt
gtctccaatcacatcttcaccgccatttttgtcacagaaacgacagttaaggttgttgct
ctgggatttttctctggtgagaatacctacctccagagcagctggaacattctggatggg
gtgttggtcttcgtctcagtaattgatatcattgtctccttggcctccgctgggggagca
aagattcttgggatacttcgggttcttcgactgctgagaacactccggccgctaagagtc
attagccgagctccaggcctcaagctggtggtagagaccttaataacatctcttcggccc
attggtaatattgtgctgatctgttgtgcattcttcatcatcttcggtatcctcggggtg
cagctgtttaaaggaaaattttactactgtgatggatttgacacaaaaaacataaccaac
aaatctgactgtctgcaaacaaactaccgatgggttcggcgaaagtacaactttgacaac
ttgggacaggccctgatgtcgctgttcgtgctctcctccaaggatggctgggtgaacatc
atgtatgatggtctggacgccgtggggatagatcagcagcctgttagaaaccacaacccg
tggatgctgctgttcttcatctccttcctgctgatcgtcagcttcttcgtgctcaacatg
tttgtgggcgtggtggtggagaacttccacaagtgccgccagcaccaggaggcagaggag
gcacgcctccgagaggagaaacgtctccggaggctggagaaaaagcgcaggaaagcccag
cgccgcccgtactatgccaattactctcctgcccgcctctacatccacactctgtgtacc
agccactacctggacctcttcatcaccttcatcatcgggattaatgtcgtcaccatgtcc
atggagcactaccatcagccaaagtccctggatgaggccctgaaatactgcaactacgtg
ttcaccatagtgtttgtgttcgaggcgatcttaaaactggtggcatttgggtttcgaaga
ttctttaaagacagatggaaccagctagatctgtccattgtacttttgtctataatggga
ataacattggaagaaattgaaatgaatgcctctcttccaattaatccaacaatcatccgc
atcatgagagtgctaagaatcgcaagagttctgaagctattaaagatggctactggaatg
cgagctttgctggatacagtggtgcaggctttgccacaggttgggaatctcggcttgctc
ttcatgctcttgttcttcatctatgcagctctgggagtggagctctttgggaagttaatt
tgtaatgatgaaaacccttgtgaaggtttaagcagacacgccacatttgagaactttgga
atggcatttcttacactgttccgtgtgtccactggtgataattggaatggcataatgaag
gacaccctgcgtgagtgtagcagtgaggacaagcactgcctgagctacctgcctctgttc
tcgccagtgtacttcgtgaccttcgtgctgattgcgcagttcgtgctggtcaacgtggtg
gtggctgtgctcatgaagcacctggaggagagcaacaaggaggccaaagaggatgcagag
atggacgctgagatcgagatggagatttcgagacggctcagcgcctcagcaggggggagg
ccactggggcctgatagcagggccagctacgtggggccaaggccagactccccagtacag
gatggagttaggtgtggcagaccagggcaggaagctggacaggagaatcttctctctgtg
aggaaagtttctgtgtccagaatgcactctctgcccaatgatagctatatgttccggccg
gtgaagtcagctaacaccccttaccccctgacagaggttgagtcttttgatggagaactg
cagtcagggtctatgatatcaatgcagtttccagaagctgaattggattctttgctccgg
gtcccggtgacaactgttcactcaaactctgcatctcctctccatgagaaaagcagcctg
cccaaaatcccagcccaacagattgcttcccgatctcccagcatcaacaggcttctgcaa
agacaggaagcaataaaacatgactcctttgacactcaaagcgatgatttgagggacaac
cttcatggccagtccagcgatagtctacagttcaaagttccggtccagagcagcctgact
ctgccattactacggcccatggcggtgtctgcccacagcacccctcagctgtctcccctc
ctgccaccccgcagccgcacttccagcgtgcacacccacaggctggtgtacagccagcac
agcattcctagtcggccctccagccaaaccagcagcaccagcccggtcagctccatgttc
gattcggtggatccaacggatgaggaggtgcagcacatcaacagctcggccaaagattgg
agcaggcagtcagaggctaggagccactccctgtccccgttcatctcccctgcccagtcg
ccagtccccctgaagaactgctgcagtgtcaccagcctggcaggagctaacatgaaggac
aaggacctgaagaagttttacagcgttgacaccgaggggttcttggctaaaccatcatgg
accgatgacccacgcaggcactccattgagatctgcccctcaatcgatgatggagactct
gtctatgaccagtccttggatgataagagacgttcttctctacacggccaattagaatct
ccatacacaccaggtacgcggaggaagaaaaagatgagcccgccttgtatctctatagat
cctcctttagagaatgagaactctgcccctgctgcatctctaaccaaagtatctgaaaac
agcatgttgttgcgcaggaggacaccgtcttgtgagtccactctttacagggactccctg
gaccttttagaagctcagcctacggcagaccaaccttcaaaatccgaaaagcggatctca
atctcctgccggaatgagcacctttccatcccccaattctccttcgaccaatcagacgtc
ggctcaatgagcagcctttcggacatcttgtctgatagtgaccaatccaccccttcatcc
tctatttcctttgactccaaaaacgaaactggggtggcctcagaactgcagaaacccgac
aacctcaaagttcagcacactgacaaccctgaaaccagcagtaaaggatcgctcagtgta
acgagaagccctttgagaaagcatgggctcgtccgcatggtcagcacgagagatgaagac
acagacgactccgtcttatag
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integrated database retrieval system
